| HOOK3 | Q86VS8 | MIR1294-201 | ENST00000408503 | 142 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RN7SKP32-201 | ENST00000410167 | 303 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | POLHP1-201 | ENST00000411806 | 470 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC096920.1-201 | ENST00000423991 | 241 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AL136972.1-201 | ENST00000443471 | 351 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AL353148.1-201 | ENST00000449761 | 463 nt | TSL 2 BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU6-333P-201 | ENST00000459117 | 107 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | LINC01487-202 | ENST00000490497 | 423 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RPL9P6-201 | ENST00000492764 | 598 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC093534.1-201 | ENST00000504977 | 132 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | MRPS17P9-201 | ENST00000511924 | 393 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | SNORA31.16-201 | ENST00000516773 | 139 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC011257.1-201 | ENST00000519048 | 281 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC024909.2-201 | ENST00000553035 | 286 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC022469.2-201 | ENST00000554759 | 396 nt | TSL 5 BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC087241.4-201 | ENST00000612441 | 480 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AL359880.1-201 | ENST00000621879 | 266 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | DYNC2H1-203 | ENST00000398093 | 12945 nt | APPRIS P3 TSL 5 BASIC | 2.09 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | TEX15-203 | ENST00000638951 | 11341 nt | APPRIS P1 TSL 5 BASIC | 2.09 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | ATF1-201 | ENST00000262053 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 2.09 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 2.09 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | ZNF702P-202 | ENST00000434269 | 1966 nt | BASIC | 2.09 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | PI15-201 | ENST00000260113 | 6732 nt | APPRIS P1 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | SNORD115-3-201 | ENST00000363100 | 82 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU4-56P-201 | ENST00000364700 | 142 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU6-1106P-201 | ENST00000390845 | 107 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MTATP6P26-201 | ENST00000445926 | 662 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC004888.1-201 | ENST00000450480 | 547 nt | TSL 2 BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | PMCHL2-203 | ENST00000457791 | 237 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC107401.1-201 | ENST00000503426 | 685 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC016632.1-201 | ENST00000503994 | 196 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC116563.1-201 | ENST00000505454 | 396 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC091885.1-201 | ENST00000506658 | 268 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU6-835P-201 | ENST00000516974 | 104 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MRPL51-203 | ENST00000538814 | 501 nt | TSL 2 BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MIR4287-201 | ENST00000579398 | 78 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MIR3945-201 | ENST00000581853 | 98 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MIR4298-201 | ENST00000584380 | 73 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC092747.3-201 | ENST00000603769 | 301 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AP000654.2-201 | ENST00000605633 | 586 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC116312.1-201 | ENST00000606841 | 314 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | ZCCHC10-202 | ENST00000355372 | 2160 nt | APPRIS ALT2 TSL 2 BASIC | 2.08 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | KTN1-214 | ENST00000554507 | 2057 nt | TSL 1 (best) BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU4-66P-201 | ENST00000365199 | 138 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | SNORD73A-201 | ENST00000386062 | 65 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNA5SP465-201 | ENST00000391195 | 109 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MTCYBP2-201 | ENST00000407745 | 171 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MIR1283-2-201 | ENST00000408621 | 87 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AP000275.1-201 | ENST00000411943 | 390 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AL669831.2-201 | ENST00000422528 | 456 nt | TSL 5 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC027124.2-201 | ENST00000428249 | 105 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | TIMM9P3-201 | ENST00000428659 | 274 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MTND2P29-201 | ENST00000438595 | 412 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AL512271.1-201 | ENST00000439878 | 434 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AL365258.1-201 | ENST00000440885 | 247 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC073325.1-201 | ENST00000443714 | 542 nt | TSL 4 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | LINC01564-201 | ENST00000448327 | 566 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RPL23AP3-201 | ENST00000453844 | 468 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC132942.1-201 | ENST00000486753 | 483 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RPS29P21-201 | ENST00000496272 | 170 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC093259.1-201 | ENST00000509755 | 300 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC010457.1-201 | ENST00000510469 | 458 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC126768.3-201 | ENST00000514519 | 560 nt | TSL 4 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU6-1038P-201 | ENST00000516516 | 104 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU6-1069P-201 | ENST00000516612 | 133 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC084879.2-201 | ENST00000551656 | 369 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AL118558.2-201 | ENST00000556294 | 238 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | PWRN1-209 | ENST00000568019 | 359 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC012493.3-201 | ENST00000604494 | 112 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MIR219B-201 | ENST00000637023 | 88 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | SLCO1B3-202 | ENST00000381545 | 2805 nt | APPRIS P1 TSL 2 BASIC | 2.07 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | SIRT1-203 | ENST00000406900 | 3295 nt | TSL 2 BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNA5SP276-201 | ENST00000362580 | 94 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | Y_RNA.99-201 | ENST00000363138 | 105 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU6-1164P-201 | ENST00000364428 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU4-20P-201 | ENST00000365601 | 151 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | Y_RNA.559-201 | ENST00000384686 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | CALM2P3-201 | ENST00000400429 | 449 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNU6-648P-201 | ENST00000410190 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AL139156.1-201 | ENST00000412785 | 841 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | Y_RNA.654-201 | ENST00000497848 | 106 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC091887.1-201 | ENST00000514002 | 439 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | Y_RNA.693-201 | ENST00000516641 | 110 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC087854.1-201 | ENST00000519706 | 414 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | IGKV3-31-201 | ENST00000523109 | 329 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC114550.2-201 | ENST00000524008 | 397 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | LINC01495-202 | ENST00000534135 | 343 nt | TSL 2 BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | CPSF6-207 | ENST00000551516 | 234 nt | TSL 2 BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | AC008083.3-202 | ENST00000552063 | 277 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MIR3923-201 | ENST00000579521 | 83 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | C1orf141-205 | ENST00000475209 | 2079 nt | APPRIS ALT2 TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | CYLC2-202 | ENST00000487798 | 2053 nt | APPRIS P1 TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | Y_RNA.378-201 | ENST00000365652 | 113 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | MIR676-201 | ENST00000390702 | 67 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | SNORA12-201 | ENST00000391162 | 147 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNA5SP201-201 | ENST00000410316 | 124 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | RNA5SP489-201 | ENST00000410986 | 109 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | ARL5AP1-201 | ENST00000418991 | 388 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HOOK3 | Q86VS8 | BX510359.4-201 | ENST00000423750 | 193 nt | BASIC | 2.05 | □□□□□ -2.08 | | |