Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SNORA11.4-201ENST00000408823 129 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AIMP1P2-201ENST00000425294 312 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 Y_RNA.665-201ENST00000516177 98 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 RNA5SP458-201ENST00000516188 119 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 SNORA31.23-201ENST00000517219 133 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC109479.2-201ENST00000517842 174 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC093249.1-201ENST00000567049 203 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC090616.3-201ENST00000582184 217 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC107304.1-201ENST00000604229 296 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC245884.12-201ENST00000615364 59 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 Y_RNA.301-201ENST00000364990 103 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 RNU6-45P-201ENST00000384471 107 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 RNU6-1072P-201ENST00000384703 107 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 RNU6-443P-201ENST00000384780 107 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 MIR561-201ENST00000385216 97 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 MT-TL1-201ENST00000386347 75 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 CBX3P9-201ENST00000402326 552 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 MTND1P23-201ENST00000416931 372 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 MTATP6P13-201ENST00000438531 667 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 CCDC34P1-201ENST00000507441 517 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC015712.3-201ENST00000559380 164 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC090517.1-201ENST00000569307 266 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 RNU6-85P-201ENST00000605989 107 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 AC121333.1-201ENST00000567488 2709 ntBASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.81□□□□□ -2.12
RAI1Q7Z5J4 RNU6-715P-201ENST00000365204 103 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 RNU6-142P-201ENST00000384019 107 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 SNORA80E-201ENST00000384744 137 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 SNORA12-201ENST00000391162 147 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 SNRPEP10-201ENST00000420249 274 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC008267.5-201ENST00000424928 265 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AL353572.1-201ENST00000442490 417 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 RPL31P41-201ENST00000477967 372 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 CKS1BP2-201ENST00000497342 240 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC008526.1-201ENST00000509149 338 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC092436.3-201ENST00000511788 257 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 RNU4-49P-201ENST00000516080 140 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AP000889.2-201ENST00000532684 490 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC011494.1-201ENST00000596454 237 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AL109809.4-201ENST00000603520 2185 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AL355297.2-201ENST00000604792 129 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 RBM11P1-201ENST00000604951 799 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC069294.1-201ENST00000608397 350 ntBASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
RAI1Q7Z5J4 SNORA67.1-201ENST00000364749 141 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 RNU6-784P-201ENST00000384330 106 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 RNU6-692P-201ENST00000384496 107 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 SNORD115-47-201ENST00000391226 86 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 AC244670.1-201ENST00000436879 112 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 UBBP3-201ENST00000445497 241 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 HMGN1P12-201ENST00000499125 195 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 MTCO2P30-201ENST00000503662 364 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 AC021146.2-201ENST00000504736 556 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 RN7SKP40-201ENST00000517211 242 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 AC087241.2-201ENST00000535801 324 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 AC091152.3-201ENST00000604227 325 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 MIR3529-201ENST00000637713 78 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 RBBP8P1-201ENST00000449447 1844 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 SNORD56.1-201ENST00000362913 68 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 RNU6-1159P-201ENST00000362933 107 ntBASIC1.79□□□□□ -2.12
RAI1Q7Z5J4 RNU6-944P-201ENST00000364023 107 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms