Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AC096638.1-201ENST00000444678 216 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 SSXP4-201ENST00000451349 245 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 SNRPGP3-201ENST00000469405 227 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AC107626.1-201ENST00000471084 183 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 RPS23P5-201ENST00000495419 428 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-1023P-201ENST00000516137 106 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 SNORA31.6-201ENST00000516241 130 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 MIR3186-201ENST00000577404 85 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AC091152.3-201ENST00000604227 325 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AC096772.1-201ENST00000609146 564 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AC240442.1-201ENST00000616055 283 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 MIR7112-201ENST00000616126 65 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 MIR335-201ENST00000362173 94 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 SNORD81.1-201ENST00000363064 77 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 RNU5F-3P-201ENST00000363767 117 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-121P-201ENST00000410525 99 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 RPS15AP7-201ENST00000439294 405 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 HMGN2P7-201ENST00000456186 273 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AP000870.1-201ENST00000472927 406 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 RPL7P47-201ENST00000497299 556 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 RNA5SP54-201ENST00000516951 92 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AC027288.2-201ENST00000553028 243 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AC012531.5-201ENST00000611375 151 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 MIR376A1-201ENST00000616574 68 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AL450472.1-202ENST00000637286 180 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 AF127577.6-201ENST00000623352 2191 ntBASIC3.85□□□□□ -1.79
RUFY4Q6ZNE9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-222P-201ENST00000362438 107 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 RNA5SP42-201ENST00000364278 115 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-159P-201ENST00000391080 106 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-1093P-201ENST00000391194 107 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 UBA52P6-201ENST00000399822 382 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 RNU2-25P-201ENST00000411041 191 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 SNORA31.1-201ENST00000515993 133 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 SNORA31.5-201ENST00000516190 133 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-579P-201ENST00000516879 102 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-388P-201ENST00000517012 105 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-389P-201ENST00000517048 105 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 YPEL5P2-201ENST00000605553 359 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 AL359198.2-201ENST00000611836 194 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 AC092628.2-201ENST00000622492 339 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 AC058791.1-201ENST00000608412 3198 ntBASIC3.84□□□□□ -1.79
RUFY4Q6ZNE9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RUFY4Q6ZNE9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
RUFY4Q6ZNE9 Y_RNA.84-201ENST00000363011 104 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 Y_RNA.105-201ENST00000363182 111 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 SNORA48.2-201ENST00000390926 124 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-1203P-201ENST00000410703 110 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 SNRPGP7-201ENST00000469016 106 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 RN7SKP49-201ENST00000516675 260 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-570P-201ENST00000517051 105 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-58P-201ENST00000517143 103 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 AC105137.2-201ENST00000569073 466 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 MIR5047-201ENST00000579212 100 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 MIR4659A-201ENST00000580269 81 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 MIR4300-201ENST00000581016 96 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 MIR3136-201ENST00000583498 78 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 MIR4298-201ENST00000584380 73 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 AC141273.2-201ENST00000618989 130 ntBASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RUFY4Q6ZNE9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 MTND5P6-201ENST00000422338 1798 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-280P-201ENST00000364145 104 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-879P-201ENST00000364328 108 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 SNORD63-201ENST00000384262 68 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-318P-201ENST00000384283 103 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-750P-201ENST00000390946 107 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 U3.39-201ENST00000408569 239 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 MIR548H3-201ENST00000408771 118 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 320.8 ms