Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF38BQ5VTL8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF38BQ5VTL8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF38BQ5VTL8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF38BQ5VTL8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
PRPF38BQ5VTL8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 AC058791.1-201ENST00000608412 3198 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 RNU4-15P-201ENST00000362613 141 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 RNU6-1010P-201ENST00000362757 107 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 Y_RNA.172-201ENST00000363765 102 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 U8.11-201ENST00000384699 133 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 U8.12-201ENST00000384701 133 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 RNU2-49P-201ENST00000410666 184 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 RPL23AP58-201ENST00000440453 469 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 U8.18-201ENST00000459285 133 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 RN7SL807P-201ENST00000470923 297 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 RNU6-237P-201ENST00000515985 71 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 HSPE1P18-201ENST00000517602 280 ntBASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF38BQ5VTL8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 UBBP2-201ENST00000376781 231 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 MIR526A2-201ENST00000390198 65 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 AC023141.4-201ENST00000412031 328 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 RNU7-141P-201ENST00000459304 62 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 AC025518.1-201ENST00000479856 347 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 RN7SL812P-201ENST00000493791 279 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 SNORA70.12-201ENST00000516084 153 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 AC127455.1-201ENST00000565496 145 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 MIR4679-2-201ENST00000578358 77 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 MIR3613-201ENST00000579844 87 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 MIR3945-201ENST00000581853 98 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 HSPE1P7-201ENST00000604681 321 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 AL391903.3-201ENST00000612158 163 ntBASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF38BQ5VTL8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 AF117829.1-206ENST00000621883 3802 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 MIR367-201ENST00000362299 68 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 RNU6-407P-201ENST00000365280 104 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 MIR30B-201ENST00000384850 88 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 MIR15B-201ENST00000385045 98 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 U3.32-201ENST00000408116 212 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 RNA5SP504-201ENST00000410676 117 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 AL157831.1-201ENST00000426134 473 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 AL714022.1-201ENST00000439897 151 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 RNU7-197P-201ENST00000458836 62 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 CYCSP30-201ENST00000546447 172 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 MIR4724-201ENST00000579485 89 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 AL136164.4-201ENST00000625013 2135 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 U6.115-201ENST00000636045 103 ntBASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF38BQ5VTL8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 RNU1-75P-201ENST00000347264 129 ntBASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 RNU6-643P-201ENST00000384018 107 ntBASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 AL591034.1-201ENST00000407447 340 ntBASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 RNU6-1064P-201ENST00000410626 104 ntBASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 AL139281.1-201ENST00000422120 335 ntBASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 RPL35AP21-201ENST00000437667 333 ntBASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 snoU13.14-201ENST00000459372 104 ntBASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 RPL30P14-201ENST00000482744 348 ntBASIC4.67□□□□□ -1.66
PRPF38BQ5VTL8 SRIP1-201ENST00000489235 288 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms