Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC012640.5-201ENST00000623897 319 ntBASIC2.1□□□□□ -2.07
GABPAQ06546 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
GABPAQ06546 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
GABPAQ06546 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 SNORA16.1-201ENST00000364597 132 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 RNA5SP190-201ENST00000365222 118 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 RNU4-20P-201ENST00000365601 151 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 RNU1-148P-201ENST00000384472 162 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 AL590002.1-201ENST00000406554 418 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 RNU6-1068P-201ENST00000410958 103 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.09□□□□□ -2.07
GABPAQ06546 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
GABPAQ06546 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.09□□□□□ -2.07
GABPAQ06546 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.09□□□□□ -2.07
GABPAQ06546 snoU13.14-201ENST00000459372 104 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.09□□□□□ -2.07
GABPAQ06546 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.09□□□□□ -2.07
GABPAQ06546 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.09□□□□□ -2.07
GABPAQ06546 AC118273.2-201ENST00000532092 465 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.09□□□□□ -2.07
GABPAQ06546 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.09□□□□□ -2.07
GABPAQ06546 HMGB1P33-201ENST00000563485 527 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 AL138976.2-201ENST00000563989 694 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 AC091135.1-201ENST00000585943 307 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 BNIP3P16-201ENST00000589779 534 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 MIR8081-201ENST00000611533 95 ntBASIC2.09□□□□□ -2.07
GABPAQ06546 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
GABPAQ06546 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
GABPAQ06546 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
GABPAQ06546 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.08
GABPAQ06546 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.08□□□□□ -2.08
GABPAQ06546 RNU1-23P-201ENST00000363361 144 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 RNU6-82P-201ENST00000363970 107 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 SNORA3A-201ENST00000364113 130 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 SNORA51.11-201ENST00000384442 131 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 SNORD73A-201ENST00000386062 65 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 RNU6-648P-201ENST00000410190 107 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 HMGB3P2-201ENST00000411913 584 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 AL117339.3-201ENST00000418733 162 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.08□□□□□ -2.08
GABPAQ06546 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.08□□□□□ -2.08
GABPAQ06546 AC013470.1-201ENST00000453438 462 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 AL353752.1-201ENST00000454946 260 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.08□□□□□ -2.08
GABPAQ06546 AC091885.1-201ENST00000506658 268 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 SNORA48.11-201ENST00000517015 89 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 COPS8P3-201ENST00000526024 482 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 AC007375.1-201ENST00000554513 578 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.08□□□□□ -2.08
GABPAQ06546 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.08□□□□□ -2.08
GABPAQ06546 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
GABPAQ06546 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.08□□□□□ -2.08
GABPAQ06546 AL162413.1-201ENST00000603198 110 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 AP000942.3-201ENST00000603702 160 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 AC063943.3-201ENST00000615562 356 ntBASIC2.08□□□□□ -2.08
GABPAQ06546 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
GABPAQ06546 KPNA2P1-201ENST00000458289 1591 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
GABPAQ06546 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
GABPAQ06546 SNORA25B-201ENST00000365507 128 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
GABPAQ06546 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
GABPAQ06546 RNU6-1274P-201ENST00000384557 107 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 RNU6-1106P-201ENST00000390845 107 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 AL355497.1-201ENST00000406262 551 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 SEPT14P3-201ENST00000439401 183 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 AL732372.2-207ENST00000445840 183 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 SEPT14P2-201ENST00000453405 183 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.07□□□□□ -2.08
GABPAQ06546 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.07□□□□□ -2.08
GABPAQ06546 SNORD13-201ENST00000459299 104 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 RNU7-138P-201ENST00000459479 64 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.07□□□□□ -2.08
GABPAQ06546 SEPT14P4-201ENST00000513445 186 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 SNORA4.4-201ENST00000515921 135 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 RNU6-323P-201ENST00000521915 107 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.07□□□□□ -2.08
GABPAQ06546 FO082796.1-201ENST00000523795 183 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.07□□□□□ -2.08
GABPAQ06546 AL357078.3-201ENST00000607528 618 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 AL121757.2-201ENST00000611223 313 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 AL161423.1-201ENST00000613700 262 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 AC103705.1-201ENST00000619013 241 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 DUXAP9-208ENST00000622815 614 ntBASIC2.07□□□□□ -2.08
GABPAQ06546 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
GABPAQ06546 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
GABPAQ06546 RPS29P13-201ENST00000402041 169 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 AL645568.3-201ENST00000433683 316 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.06□□□□□ -2.08
GABPAQ06546 Y_RNA.654-201ENST00000497848 106 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.06□□□□□ -2.08
GABPAQ06546 RNU5F-2P-201ENST00000516066 82 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 SNORA25.15-201ENST00000516487 89 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 SNORD60.2-201ENST00000516883 86 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.06□□□□□ -2.08
GABPAQ06546 AC115990.1-201ENST00000526957 301 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms