Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.35□□□□□ -1.87
IRF9Q00978 AC023824.2-201ENST00000566185 400 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 MIR4300-201ENST00000581016 96 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.35□□□□□ -1.87
IRF9Q00978 AC012442.3-202ENST00000636742 206 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.35□□□□□ -1.87
IRF9Q00978 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
IRF9Q00978 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
IRF9Q00978 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
IRF9Q00978 AC010615.1-201ENST00000594254 1764 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
IRF9Q00978 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 LINC02555-201ENST00000563933 1951 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
IRF9Q00978 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
IRF9Q00978 SNORD115-46-201ENST00000390982 71 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 RNA5SP354-201ENST00000391247 136 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 SNORD12B-201ENST00000410433 91 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 AL159169.1-201ENST00000421119 127 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 AC112771.1-201ENST00000463581 102 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 AC098869.1-201ENST00000481627 292 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.34□□□□□ -1.87
IRF9Q00978 SCARNA20.6-201ENST00000517251 106 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 RNU6-794P-201ENST00000517261 64 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 IGKV2-23-201ENST00000518729 323 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.34□□□□□ -1.87
IRF9Q00978 MIR3668-201ENST00000582138 75 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 AC073410.2-201ENST00000603240 332 ntBASIC3.34□□□□□ -1.87
IRF9Q00978 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
IRF9Q00978 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
IRF9Q00978 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
IRF9Q00978 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
IRF9Q00978 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
IRF9Q00978 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
IRF9Q00978 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
IRF9Q00978 RNU6-280P-201ENST00000364145 104 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 Y_RNA.350-201ENST00000365409 98 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 Y_RNA.447-201ENST00000384184 113 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 Y_RNA.489-201ENST00000384410 101 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 Y_RNA.518-201ENST00000384552 113 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 MIR186-201ENST00000384988 86 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 SNORD17-201ENST00000390930 237 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 U3.26-201ENST00000391236 204 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 MIR208B-201ENST00000401172 77 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 RNU2-38P-201ENST00000410856 79 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
IRF9Q00978 AIMP1P2-201ENST00000425294 312 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.33□□□□□ -1.88
IRF9Q00978 AL358232.1-201ENST00000448030 501 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.33□□□□□ -1.88
IRF9Q00978 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.33□□□□□ -1.88
IRF9Q00978 MIR3923-201ENST00000579521 83 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.33□□□□□ -1.88
IRF9Q00978 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 AC005520.5-201ENST00000613926 164 ntBASIC3.33□□□□□ -1.88
IRF9Q00978 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.33□□□□□ -1.88
IRF9Q00978 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
IRF9Q00978 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
IRF9Q00978 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
IRF9Q00978 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
IRF9Q00978 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
IRF9Q00978 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
IRF9Q00978 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
IRF9Q00978 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.32□□□□□ -1.88
IRF9Q00978 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
IRF9Q00978 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
IRF9Q00978 AL109809.4-201ENST00000603520 2185 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
IRF9Q00978 RNU4-35P-201ENST00000362588 141 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 Y_RNA.84-201ENST00000363011 104 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 RNU6-379P-201ENST00000363813 104 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 RNU6-873P-201ENST00000363833 107 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 RNU1-57P-201ENST00000384491 166 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 MIR591-201ENST00000385290 95 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.32□□□□□ -1.88
IRF9Q00978 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.32□□□□□ -1.88
IRF9Q00978 AC096920.1-201ENST00000423991 241 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 AC009414.1-201ENST00000427200 443 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 AC112220.1-201ENST00000434628 355 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
IRF9Q00978 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.32□□□□□ -1.88
IRF9Q00978 AC007215.1-201ENST00000464893 276 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 AC091153.1-201ENST00000466297 402 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 RPL36AP48-201ENST00000485521 314 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 RNU1-95P-201ENST00000516357 160 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 SNORA64.4-201ENST00000516632 81 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 RNU1-128P-201ENST00000516704 160 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 AC079598.5-201ENST00000547460 117 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms