Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PER3P56645 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.19□□□□□ -1.9
PER3P56645 SNORA63.7-201ENST00000365579 123 ntBASIC3.19□□□□□ -1.9
PER3P56645 RNU6-505P-201ENST00000384427 107 ntBASIC3.19□□□□□ -1.9
PER3P56645 RNU6-130P-201ENST00000411112 103 ntBASIC3.19□□□□□ -1.9
PER3P56645 AC009414.1-201ENST00000427200 443 ntBASIC3.19□□□□□ -1.9
PER3P56645 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.19□□□□□ -1.9
PER3P56645 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.19□□□□□ -1.9
PER3P56645 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
PER3P56645 AC006445.1-201ENST00000491925 405 ntBASIC3.19□□□□□ -1.9
PER3P56645 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.19□□□□□ -1.9
PER3P56645 AC068657.1-201ENST00000520807 306 ntBASIC3.19□□□□□ -1.9
PER3P56645 AP002770.2-201ENST00000543613 532 ntBASIC3.19□□□□□ -1.9
PER3P56645 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.19□□□□□ -1.9
PER3P56645 AL355877.2-201ENST00000603670 358 ntBASIC3.19□□□□□ -1.9
PER3P56645 RNU6-91P-201ENST00000607774 107 ntBASIC3.19□□□□□ -1.9
PER3P56645 AL162274.2-201ENST00000614406 332 ntBASIC3.19□□□□□ -1.9
PER3P56645 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PER3P56645 AC002543.1-201ENST00000299783 1954 ntBASIC3.19□□□□□ -1.9
PER3P56645 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PER3P56645 Z75746.1-201ENST00000440243 2080 ntBASIC3.18□□□□□ -1.9
PER3P56645 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PER3P56645 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PER3P56645 AC092268.1-201ENST00000342691 405 ntBASIC3.18□□□□□ -1.9
PER3P56645 Y_RNA.27-201ENST00000362540 103 ntBASIC3.18□□□□□ -1.9
PER3P56645 RNU4-35P-201ENST00000362588 141 ntBASIC3.18□□□□□ -1.9
PER3P56645 RNU4-50P-201ENST00000364361 141 ntBASIC3.18□□□□□ -1.9
PER3P56645 RNU6-806P-201ENST00000365147 105 ntBASIC3.18□□□□□ -1.9
PER3P56645 Y_RNA.526-201ENST00000384572 110 ntBASIC3.18□□□□□ -1.9
PER3P56645 MIR153-2-201ENST00000385225 87 ntBASIC3.18□□□□□ -1.9
PER3P56645 AC126124.2-201ENST00000413542 321 ntBASIC3.18□□□□□ -1.9
PER3P56645 CYCSP48-201ENST00000417124 323 ntBASIC3.18□□□□□ -1.9
PER3P56645 DYNLT3P2-201ENST00000442517 295 ntBASIC3.18□□□□□ -1.9
PER3P56645 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.18□□□□□ -1.9
PER3P56645 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.18□□□□□ -1.9
PER3P56645 snoU13.6-201ENST00000458785 104 ntBASIC3.18□□□□□ -1.9
PER3P56645 AP000870.1-201ENST00000472927 406 ntBASIC3.18□□□□□ -1.9
PER3P56645 UBE2DNL-203ENST00000474922 222 ntBASIC3.18□□□□□ -1.9
PER3P56645 RPS27P26-201ENST00000494583 239 ntBASIC3.18□□□□□ -1.9
PER3P56645 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.18□□□□□ -1.9
PER3P56645 RPL23AP94-201ENST00000512518 302 ntBASIC3.18□□□□□ -1.9
PER3P56645 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.18□□□□□ -1.9
PER3P56645 AC034114.1-201ENST00000520293 285 ntBASIC3.18□□□□□ -1.9
PER3P56645 AP002404.1-201ENST00000532005 451 ntBASIC3.18□□□□□ -1.9
PER3P56645 AC027288.2-201ENST00000553028 243 ntBASIC3.18□□□□□ -1.9
PER3P56645 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.18□□□□□ -1.9
PER3P56645 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.18□□□□□ -1.9
PER3P56645 AC107294.3-201ENST00000609211 526 ntBASIC3.18□□□□□ -1.9
PER3P56645 U4.1-201ENST00000620349 87 ntBASIC3.18□□□□□ -1.9
PER3P56645 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
PER3P56645 AC007792.1-201ENST00000623023 402 ntBASIC3.18□□□□□ -1.9
PER3P56645 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
PER3P56645 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PER3P56645 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PER3P56645 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PER3P56645 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.17□□□□□ -1.9
PER3P56645 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PER3P56645 RNU6-1301P-201ENST00000362724 104 ntBASIC3.17□□□□□ -1.9
PER3P56645 Y_RNA.152-201ENST00000363578 100 ntBASIC3.17□□□□□ -1.9
PER3P56645 Y_RNA.222-201ENST00000364264 102 ntBASIC3.17□□□□□ -1.9
PER3P56645 U3.13-201ENST00000364804 214 ntBASIC3.17□□□□□ -1.9
PER3P56645 Y_RNA.458-201ENST00000384240 102 ntBASIC3.17□□□□□ -1.9
PER3P56645 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
PER3P56645 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.17□□□□□ -1.9
PER3P56645 AC006989.1-201ENST00000427212 131 ntBASIC3.17□□□□□ -1.9
PER3P56645 RPEP5-201ENST00000441137 268 ntBASIC3.17□□□□□ -1.9
PER3P56645 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.17□□□□□ -1.9
PER3P56645 AP001324.2-201ENST00000461163 319 ntBASIC3.17□□□□□ -1.9
PER3P56645 AC090525.1-201ENST00000479116 478 ntBASIC3.17□□□□□ -1.9
PER3P56645 GZMAP1-201ENST00000503054 631 ntBASIC3.17□□□□□ -1.9
PER3P56645 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
PER3P56645 SNORA25.11-201ENST00000515935 105 ntBASIC3.17□□□□□ -1.9
PER3P56645 RNU5F-2P-201ENST00000516066 82 ntBASIC3.17□□□□□ -1.9
PER3P56645 RNU6-397P-201ENST00000516226 104 ntBASIC3.17□□□□□ -1.9
PER3P56645 SNORA70.18-201ENST00000516696 98 ntBASIC3.17□□□□□ -1.9
PER3P56645 SNORD59.2-201ENST00000516873 68 ntBASIC3.17□□□□□ -1.9
PER3P56645 MIR2355-201ENST00000517199 87 ntBASIC3.17□□□□□ -1.9
PER3P56645 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.17□□□□□ -1.9
PER3P56645 AC021231.3-201ENST00000558497 370 ntBASIC3.17□□□□□ -1.9
PER3P56645 AC004817.2-201ENST00000561794 651 ntBASIC3.17□□□□□ -1.9
PER3P56645 MYL12BP1-201ENST00000569826 507 ntBASIC3.17□□□□□ -1.9
PER3P56645 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
PER3P56645 MIR3671-201ENST00000580455 88 ntBASIC3.17□□□□□ -1.9
PER3P56645 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.17□□□□□ -1.9
PER3P56645 RPS29P30-201ENST00000600975 111 ntBASIC3.17□□□□□ -1.9
PER3P56645 AL390123.1-201ENST00000603216 237 ntBASIC3.17□□□□□ -1.9
PER3P56645 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.17□□□□□ -1.9
PER3P56645 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
PER3P56645 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.17□□□□□ -1.9
PER3P56645 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PER3P56645 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PER3P56645 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.17□□□□□ -1.9
PER3P56645 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
PER3P56645 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PER3P56645 AC007496.3-201ENST00000624987 3443 ntBASIC3.16□□□□□ -1.9
PER3P56645 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PER3P56645 AC000403.1-201ENST00000613696 3585 ntBASIC3.16□□□□□ -1.9
PER3P56645 RNU6-1010P-201ENST00000362757 107 ntBASIC3.16□□□□□ -1.9
PER3P56645 Y_RNA.276-201ENST00000364732 109 ntBASIC3.16□□□□□ -1.9
PER3P56645 Y_RNA.471-201ENST00000384312 102 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms