Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SEPT14P19-203ENST00000633205 211 ntBASIC1.45□□□□□ -2.18
CDH6P55285 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CDH6P55285 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.45□□□□□ -2.18
CDH6P55285 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.44□□□□□ -2.18
CDH6P55285 RNU6-428P-201ENST00000362942 107 ntBASIC1.44□□□□□ -2.18
CDH6P55285 RNU4-56P-201ENST00000364700 142 ntBASIC1.44□□□□□ -2.18
CDH6P55285 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CDH6P55285 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CDH6P55285 RNU6-43P-201ENST00000384302 107 ntBASIC1.44□□□□□ -2.18
CDH6P55285 RNU6-482P-201ENST00000391068 107 ntBASIC1.44□□□□□ -2.18
CDH6P55285 SNORA26.8-201ENST00000391306 124 ntBASIC1.44□□□□□ -2.18
CDH6P55285 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.44□□□□□ -2.18
CDH6P55285 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.44□□□□□ -2.18
CDH6P55285 BX295541.1-201ENST00000417774 250 ntBASIC1.44□□□□□ -2.18
CDH6P55285 AC123900.1-201ENST00000420390 96 ntBASIC1.44□□□□□ -2.18
CDH6P55285 MTND2P9-201ENST00000422293 931 ntBASIC1.44□□□□□ -2.18
CDH6P55285 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.44□□□□□ -2.18
CDH6P55285 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.44□□□□□ -2.18
CDH6P55285 AC130509.1-201ENST00000464158 433 ntBASIC1.44□□□□□ -2.18
CDH6P55285 FO393415.2-201ENST00000480085 343 ntBASIC1.44□□□□□ -2.18
CDH6P55285 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.44□□□□□ -2.18
CDH6P55285 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.44□□□□□ -2.18
CDH6P55285 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
CDH6P55285 MIR4760-201ENST00000585040 80 ntBASIC1.44□□□□□ -2.18
CDH6P55285 VN1R107P-201ENST00000601784 209 ntBASIC1.44□□□□□ -2.18
CDH6P55285 AP001485.1-201ENST00000604799 199 ntBASIC1.44□□□□□ -2.18
CDH6P55285 AC008945.2-201ENST00000606056 604 ntBASIC1.44□□□□□ -2.18
CDH6P55285 AC006566.1-201ENST00000608943 513 ntBASIC1.44□□□□□ -2.18
CDH6P55285 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
CDH6P55285 ZNF72P-201ENST00000425869 1908 ntBASIC1.44□□□□□ -2.18
CDH6P55285 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.43□□□□□ -2.18
CDH6P55285 FGF7P2-201ENST00000332473 296 ntBASIC1.43□□□□□ -2.18
CDH6P55285 RNU6-1097P-201ENST00000363586 107 ntBASIC1.43□□□□□ -2.18
CDH6P55285 RNU6-336P-201ENST00000364891 107 ntBASIC1.43□□□□□ -2.18
CDH6P55285 RNU6-439P-201ENST00000384188 106 ntBASIC1.43□□□□□ -2.18
CDH6P55285 RNY3P10-201ENST00000384764 102 ntBASIC1.43□□□□□ -2.18
CDH6P55285 MTCYBP2-201ENST00000407745 171 ntBASIC1.43□□□□□ -2.18
CDH6P55285 RNU4-46P-201ENST00000410818 138 ntBASIC1.43□□□□□ -2.18
CDH6P55285 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.43□□□□□ -2.18
CDH6P55285 AC244670.1-201ENST00000436879 112 ntBASIC1.43□□□□□ -2.18
CDH6P55285 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.43□□□□□ -2.18
CDH6P55285 MTCO3P7-201ENST00000510008 774 ntBASIC1.43□□□□□ -2.18
CDH6P55285 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.43□□□□□ -2.18
CDH6P55285 RN7SKP219-201ENST00000516825 296 ntBASIC1.43□□□□□ -2.18
CDH6P55285 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.43□□□□□ -2.18
CDH6P55285 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.43□□□□□ -2.18
CDH6P55285 AC110760.3-201ENST00000598794 467 ntBASIC1.43□□□□□ -2.18
CDH6P55285 AC245014.2-201ENST00000603689 287 ntBASIC1.43□□□□□ -2.18
CDH6P55285 AC246785.4-201ENST00000605374 287 ntBASIC1.43□□□□□ -2.18
CDH6P55285 ZNF209P-201ENST00000593450 2304 ntBASIC1.42□□□□□ -2.18
CDH6P55285 U3.4-201ENST00000363352 213 ntBASIC1.42□□□□□ -2.18
CDH6P55285 Y_RNA.201-201ENST00000364052 96 ntBASIC1.42□□□□□ -2.18
CDH6P55285 RNU6-282P-201ENST00000365357 103 ntBASIC1.42□□□□□ -2.18
CDH6P55285 RNU6-456P-201ENST00000384493 107 ntBASIC1.42□□□□□ -2.18
CDH6P55285 MTND2P18-201ENST00000419962 1030 ntBASIC1.42□□□□□ -2.18
CDH6P55285 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
CDH6P55285 AL590135.1-201ENST00000422215 156 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.42□□□□□ -2.18
CDH6P55285 AC019205.3-201ENST00000424573 156 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC078809.1-201ENST00000427601 140 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC010975.2-201ENST00000427781 588 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH6P55285 MTCO1P44-201ENST00000441935 243 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC016700.2-201ENST00000446011 156 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH6P55285 SNORD42A-201ENST00000459584 64 ntBASIC1.42□□□□□ -2.18
CDH6P55285 MTCO2P6-201ENST00000463134 685 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC087477.1-201ENST00000465747 340 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC015911.1-201ENST00000495111 156 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC114801.2-201ENST00000503825 781 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH6P55285 MTCO3P28-201ENST00000513351 515 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH6P55285 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.42□□□□□ -2.18
CDH6P55285 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
CDH6P55285 MIR4703-201ENST00000577728 79 ntBASIC1.42□□□□□ -2.18
CDH6P55285 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH6P55285 AL356157.2-201ENST00000605122 111 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AL512598.1-201ENST00000610158 273 ntBASIC1.42□□□□□ -2.18
CDH6P55285 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
CDH6P55285 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
CDH6P55285 uc_338.11-201ENST00000619132 160 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC091304.6-201ENST00000619761 202 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC120349.3-201ENST00000624377 529 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AC022513.1-201ENST00000624512 117 ntBASIC1.42□□□□□ -2.18
CDH6P55285 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.42□□□□□ -2.18
CDH6P55285 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CDH6P55285 RNU1-62P-201ENST00000362599 164 ntBASIC1.41□□□□□ -2.18
CDH6P55285 RNA5SP99-201ENST00000364020 114 ntBASIC1.41□□□□□ -2.18
CDH6P55285 RNU4-48P-201ENST00000365559 182 ntBASIC1.41□□□□□ -2.18
CDH6P55285 Y_RNA.480-201ENST00000384364 102 ntBASIC1.41□□□□□ -2.18
CDH6P55285 RNU6-393P-201ENST00000384475 107 ntBASIC1.41□□□□□ -2.18
CDH6P55285 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
CDH6P55285 RN7SKP61-201ENST00000410642 295 ntBASIC1.41□□□□□ -2.18
CDH6P55285 MTCO3P41-201ENST00000414801 328 ntBASIC1.41□□□□□ -2.18
CDH6P55285 MTCO3P46-201ENST00000425787 232 ntBASIC1.41□□□□□ -2.18
CDH6P55285 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
CDH6P55285 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH6P55285 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms