Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLK3P49761 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLK3P49761 SNORA40C-201ENST00000391285 128 ntBASIC3.15□□□□□ -1.91
CLK3P49761 SNORA48.7-201ENST00000391302 135 ntBASIC3.15□□□□□ -1.91
CLK3P49761 HMGN2P30-201ENST00000423237 256 ntBASIC3.15□□□□□ -1.91
CLK3P49761 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.15□□□□□ -1.91
CLK3P49761 NDUFB4P10-201ENST00000452541 359 ntBASIC3.15□□□□□ -1.91
CLK3P49761 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
CLK3P49761 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.15□□□□□ -1.91
CLK3P49761 AC034236.1-201ENST00000469891 373 ntBASIC3.15□□□□□ -1.91
CLK3P49761 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.15□□□□□ -1.91
CLK3P49761 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
CLK3P49761 RNU6-377P-201ENST00000515965 102 ntBASIC3.15□□□□□ -1.91
CLK3P49761 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
CLK3P49761 RNU6-1012P-201ENST00000516606 109 ntBASIC3.15□□□□□ -1.91
CLK3P49761 SCARNA24.2-201ENST00000516968 130 ntBASIC3.15□□□□□ -1.91
CLK3P49761 SCARNA20.6-201ENST00000517251 106 ntBASIC3.15□□□□□ -1.91
CLK3P49761 RNU6-711P-201ENST00000517255 106 ntBASIC3.15□□□□□ -1.91
CLK3P49761 MIR4643-201ENST00000577473 78 ntBASIC3.15□□□□□ -1.91
CLK3P49761 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.15□□□□□ -1.91
CLK3P49761 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.15□□□□□ -1.91
CLK3P49761 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
CLK3P49761 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
CLK3P49761 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
CLK3P49761 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
CLK3P49761 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.15□□□□□ -1.91
CLK3P49761 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.15□□□□□ -1.91
CLK3P49761 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.15□□□□□ -1.91
CLK3P49761 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CLK3P49761 MIR411-201ENST00000362239 96 ntBASIC3.14□□□□□ -1.91
CLK3P49761 RNU6-428P-201ENST00000362942 107 ntBASIC3.14□□□□□ -1.91
CLK3P49761 Y_RNA.123-201ENST00000363338 102 ntBASIC3.14□□□□□ -1.91
CLK3P49761 SNORD113-8-201ENST00000363497 74 ntBASIC3.14□□□□□ -1.91
CLK3P49761 SNORD78.2-201ENST00000391076 69 ntBASIC3.14□□□□□ -1.91
CLK3P49761 RNA5SP252-201ENST00000391131 119 ntBASIC3.14□□□□□ -1.91
CLK3P49761 Y_RNA.602-201ENST00000410535 92 ntBASIC3.14□□□□□ -1.91
CLK3P49761 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.14□□□□□ -1.91
CLK3P49761 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.14□□□□□ -1.91
CLK3P49761 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.14□□□□□ -1.91
CLK3P49761 RPL21P40-201ENST00000428586 483 ntBASIC3.14□□□□□ -1.91
CLK3P49761 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.14□□□□□ -1.91
CLK3P49761 RNU6-496P-201ENST00000516145 99 ntBASIC3.14□□□□□ -1.91
CLK3P49761 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.14□□□□□ -1.91
CLK3P49761 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.14□□□□□ -1.91
CLK3P49761 AC090617.3-201ENST00000573670 475 ntBASIC3.14□□□□□ -1.91
CLK3P49761 AC060766.3-201ENST00000591442 263 ntBASIC3.14□□□□□ -1.91
CLK3P49761 AC073657.2-201ENST00000605661 303 ntBASIC3.14□□□□□ -1.91
CLK3P49761 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.14□□□□□ -1.91
CLK3P49761 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.14□□□□□ -1.91
CLK3P49761 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CLK3P49761 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.14□□□□□ -1.91
CLK3P49761 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLK3P49761 RNU4-35P-201ENST00000362588 141 ntBASIC3.13□□□□□ -1.91
CLK3P49761 RNU6-198P-201ENST00000384258 104 ntBASIC3.13□□□□□ -1.91
CLK3P49761 SNORD63-201ENST00000384262 68 ntBASIC3.13□□□□□ -1.91
CLK3P49761 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
CLK3P49761 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLK3P49761 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.13□□□□□ -1.91
CLK3P49761 U8.22-201ENST00000459141 133 ntBASIC3.13□□□□□ -1.91
CLK3P49761 RPL21P10-201ENST00000463521 490 ntBASIC3.13□□□□□ -1.91
CLK3P49761 SEPT14P8-201ENST00000508026 178 ntBASIC3.13□□□□□ -1.91
CLK3P49761 RNU1-103P-201ENST00000516502 125 ntBASIC3.13□□□□□ -1.91
CLK3P49761 SNORA31.19-201ENST00000517079 126 ntBASIC3.13□□□□□ -1.91
CLK3P49761 AP002392.1-201ENST00000537692 208 ntBASIC3.13□□□□□ -1.91
CLK3P49761 AL391261.3-201ENST00000557194 520 ntBASIC3.13□□□□□ -1.91
CLK3P49761 MIR1254-2-201ENST00000579553 63 ntBASIC3.13□□□□□ -1.91
CLK3P49761 AC010620.2-201ENST00000600135 313 ntBASIC3.13□□□□□ -1.91
CLK3P49761 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
CLK3P49761 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
CLK3P49761 U2.21-201ENST00000637295 81 ntBASIC3.13□□□□□ -1.91
CLK3P49761 U4.7-201ENST00000638126 106 ntBASIC3.13□□□□□ -1.91
CLK3P49761 AC132825.6-201ENST00000638861 357 ntBASIC3.13□□□□□ -1.91
CLK3P49761 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CLK3P49761 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLK3P49761 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLK3P49761 RNU6-1301P-201ENST00000362724 104 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RNU4-9P-201ENST00000364951 139 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RNU6-290P-201ENST00000365212 101 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RNU5E-7P-201ENST00000365290 117 ntBASIC3.12□□□□□ -1.91
CLK3P49761 SNORD113-1-201ENST00000365321 69 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RNU1-73P-201ENST00000383971 164 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RNU6-937P-201ENST00000384325 106 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RNU6-166P-201ENST00000384371 107 ntBASIC3.12□□□□□ -1.91
CLK3P49761 Y_RNA.506-201ENST00000384494 102 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RNU6-125P-201ENST00000384505 107 ntBASIC3.12□□□□□ -1.91
CLK3P49761 SNORD17-201ENST00000390930 237 ntBASIC3.12□□□□□ -1.91
CLK3P49761 AL033519.2-201ENST00000403958 392 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RPL26P27-201ENST00000414397 437 ntBASIC3.12□□□□□ -1.91
CLK3P49761 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK3P49761 RPL37P4-201ENST00000448908 268 ntBASIC3.12□□□□□ -1.91
CLK3P49761 RPL26P9-201ENST00000457466 433 ntBASIC3.12□□□□□ -1.91
CLK3P49761 AL031183.1-201ENST00000457667 207 ntBASIC3.12□□□□□ -1.91
CLK3P49761 AC092798.1-201ENST00000458542 409 ntBASIC3.12□□□□□ -1.91
CLK3P49761 COX6CP14-201ENST00000469580 174 ntBASIC3.12□□□□□ -1.91
CLK3P49761 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
CLK3P49761 RPL7P49-201ENST00000471402 708 ntBASIC3.12□□□□□ -1.91
CLK3P49761 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK3P49761 AC107393.1-201ENST00000512403 346 ntBASIC3.12□□□□□ -1.91
CLK3P49761 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
CLK3P49761 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms