Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SNORD78.1-201ENST00000390866 65 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 AL031003.1-201ENST00000404229 172 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 RNA5SP306-201ENST00000411087 107 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 RNU6-592P-201ENST00000411333 103 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRNA4P43681 AC004975.1-201ENST00000428733 208 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 SCARNA15.2-201ENST00000516409 127 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 AC025627.2-201ENST00000576220 160 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 MIR6716-201ENST00000613413 80 ntBASIC4.09□□□□□ -1.75
CHRNA4P43681 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRNA4P43681 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA4P43681 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA4P43681 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA4P43681 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.09□□□□□ -1.75
CHRNA4P43681 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA4P43681 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CHRNA4P43681 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CHRNA4P43681 AC073073.2-201ENST00000609827 2578 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRNA4P43681 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHRNA4P43681 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CHRNA4P43681 MIR367-201ENST00000362299 68 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 SNORD115-30-201ENST00000364117 82 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 SNORD74.4-201ENST00000364129 80 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 Y_RNA.219-201ENST00000364232 113 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.08□□□□□ -1.76
CHRNA4P43681 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRNA4P43681 SNORA57.1-201ENST00000391227 145 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.08□□□□□ -1.76
CHRNA4P43681 AC069285.2-201ENST00000440210 275 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 AL645939.1-201ENST00000453429 797 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 RNU7-141P-201ENST00000459304 62 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CHRNA4P43681 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 UBE2CP3-201ENST00000502715 450 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.08□□□□□ -1.76
CHRNA4P43681 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.08□□□□□ -1.76
CHRNA4P43681 SNORA40.13-201ENST00000516379 120 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 HSPE1P4-201ENST00000550617 308 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 AC022336.2-201ENST00000568966 2538 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 MIR378D2-201ENST00000580636 98 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.08□□□□□ -1.76
CHRNA4P43681 AC025166.1-201ENST00000612411 163 ntBASIC4.08□□□□□ -1.76
CHRNA4P43681 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHRNA4P43681 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHRNA4P43681 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CHRNA4P43681 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CHRNA4P43681 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CHRNA4P43681 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHRNA4P43681 RNU6-1336P-201ENST00000383886 109 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 RNU6-1264P-201ENST00000383891 107 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 RNU6-144P-201ENST00000383951 107 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 Y_RNA.456-201ENST00000384232 111 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 RNU6-820P-201ENST00000384273 107 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 RNU6-1152P-201ENST00000384576 107 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 MIR23B-201ENST00000384832 97 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 RNU6-837P-201ENST00000391056 108 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 RN7SKP61-201ENST00000410642 295 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 AC007215.1-201ENST00000464893 276 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 RPL21P129-201ENST00000491732 478 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.07□□□□□ -1.76
CHRNA4P43681 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.07□□□□□ -1.76
CHRNA4P43681 AL591034.3-201ENST00000605511 685 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 MIR6867-201ENST00000610636 67 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 AL442128.1-201ENST00000615151 90 ntBASIC4.07□□□□□ -1.76
CHRNA4P43681 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CHRNA4P43681 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHRNA4P43681 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.07□□□□□ -1.76
CHRNA4P43681 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHRNA4P43681 SNORD45.3-201ENST00000363836 72 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 RNU6-1141P-201ENST00000364520 107 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 RNU1-140P-201ENST00000365040 165 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 MIR488-201ENST00000365739 83 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 AL603914.1-201ENST00000401964 204 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 SNORA3C-201ENST00000408792 125 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 RNA5SP239-201ENST00000410218 129 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.06□□□□□ -1.76
CHRNA4P43681 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.06□□□□□ -1.76
CHRNA4P43681 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.06□□□□□ -1.76
CHRNA4P43681 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.06□□□□□ -1.76
CHRNA4P43681 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.06□□□□□ -1.76
CHRNA4P43681 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.06□□□□□ -1.76
CHRNA4P43681 AC021231.3-201ENST00000558497 370 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.06□□□□□ -1.76
CHRNA4P43681 MIR3160-1-201ENST00000577972 85 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.06□□□□□ -1.76
CHRNA4P43681 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHRNA4P43681 RPL30P11-203ENST00000598995 310 ntBASIC4.06□□□□□ -1.76
CHRNA4P43681 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.06□□□□□ -1.76
CHRNA4P43681 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.06□□□□□ -1.76
CHRNA4P43681 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHRNA4P43681 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHRNA4P43681 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.06□□□□□ -1.76
CHRNA4P43681 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.06□□□□□ -1.76
CHRNA4P43681 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CHRNA4P43681 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHRNA4P43681 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHRNA4P43681 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms