Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
HOXC8P31273 Y_RNA.11-201ENST00000362375 109 ntBASIC2.57□□□□□ -2
HOXC8P31273 RNU6-562P-201ENST00000362731 107 ntBASIC2.57□□□□□ -2
HOXC8P31273 RNU4-79P-201ENST00000362764 141 ntBASIC2.57□□□□□ -2
HOXC8P31273 SNORD114-19-201ENST00000363072 75 ntBASIC2.57□□□□□ -2
HOXC8P31273 Y_RNA.813-201ENST00000364639 102 ntBASIC2.57□□□□□ -2
HOXC8P31273 RNU6-72P-201ENST00000384285 79 ntBASIC2.57□□□□□ -2
HOXC8P31273 RNU6-1072P-201ENST00000384703 107 ntBASIC2.57□□□□□ -2
HOXC8P31273 RNU6-443P-201ENST00000384780 107 ntBASIC2.57□□□□□ -2
HOXC8P31273 MIR548K-201ENST00000408406 116 ntBASIC2.57□□□□□ -2
HOXC8P31273 RNU4-14P-201ENST00000410858 122 ntBASIC2.57□□□□□ -2
HOXC8P31273 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
HOXC8P31273 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.57□□□□□ -2
HOXC8P31273 MTND4P28-201ENST00000426217 387 ntBASIC2.57□□□□□ -2
HOXC8P31273 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.57□□□□□ -2
HOXC8P31273 AC107399.1-201ENST00000451226 265 ntBASIC2.57□□□□□ -2
HOXC8P31273 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.57□□□□□ -2
HOXC8P31273 RNU7-138P-201ENST00000459479 64 ntBASIC2.57□□□□□ -2
HOXC8P31273 MED28P2-201ENST00000475771 317 ntBASIC2.57□□□□□ -2
HOXC8P31273 AC018437.1-201ENST00000492214 406 ntBASIC2.57□□□□□ -2
HOXC8P31273 SMURF2P1-201ENST00000514992 481 ntBASIC2.57□□□□□ -2
HOXC8P31273 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.57□□□□□ -2
HOXC8P31273 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
HOXC8P31273 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXC8P31273 RNU6-37P-201ENST00000362692 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 Y_RNA.135-201ENST00000363439 95 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-11P-201ENST00000364234 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 Y_RNA.339-201ENST00000365325 102 ntBASIC2.56□□□□□ -2
HOXC8P31273 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.56□□□□□ -2
HOXC8P31273 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HOXC8P31273 RNU6-25P-201ENST00000383873 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-1-201ENST00000383898 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-48P-201ENST00000384161 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-36P-201ENST00000384172 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-4P-201ENST00000384205 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-5P-201ENST00000384238 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-3P-201ENST00000384314 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-16P-201ENST00000384385 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-15P-201ENST00000384534 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-2-201ENST00000384627 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-29P-201ENST00000384637 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-9-201ENST00000384776 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-33P-201ENST00000384793 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 CYCSP48-201ENST00000417124 323 ntBASIC2.56□□□□□ -2
HOXC8P31273 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 AL139396.1-201ENST00000421137 167 ntBASIC2.56□□□□□ -2
HOXC8P31273 RPS3AP52-201ENST00000435639 297 ntBASIC2.56□□□□□ -2
HOXC8P31273 AL359672.1-201ENST00000442302 409 ntBASIC2.56□□□□□ -2
HOXC8P31273 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 RPS27P27-201ENST00000498779 255 ntBASIC2.56□□□□□ -2
HOXC8P31273 MTND5P5-201ENST00000503764 376 ntBASIC2.56□□□□□ -2
HOXC8P31273 HMGB3P3-201ENST00000510526 400 ntBASIC2.56□□□□□ -2
HOXC8P31273 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
HOXC8P31273 AC104576.1-201ENST00000524225 88 ntBASIC2.56□□□□□ -2
HOXC8P31273 AP005597.4-201ENST00000526762 229 ntBASIC2.56□□□□□ -2
HOXC8P31273 AC079598.5-201ENST00000547460 117 ntBASIC2.56□□□□□ -2
HOXC8P31273 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 AC113139.1-201ENST00000605049 239 ntBASIC2.56□□□□□ -2
HOXC8P31273 AC016727.1-205ENST00000605437 569 ntBASIC2.56□□□□□ -2
HOXC8P31273 RNU6-6P-201ENST00000606623 107 ntBASIC2.56□□□□□ -2
HOXC8P31273 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.56□□□□□ -2
HOXC8P31273 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.56□□□□□ -2
HOXC8P31273 HMGB1P24-202ENST00000615653 685 ntBASIC2.56□□□□□ -2
HOXC8P31273 MIR5739-201ENST00000619803 80 ntBASIC2.56□□□□□ -2
HOXC8P31273 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXC8P31273 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXC8P31273 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HOXC8P31273 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC8P31273 Y_RNA.384-201ENST00000383909 102 ntBASIC2.55□□□□□ -2
HOXC8P31273 RNU6-128P-201ENST00000383976 107 ntBASIC2.55□□□□□ -2
HOXC8P31273 RNU6-214P-201ENST00000384130 107 ntBASIC2.55□□□□□ -2
HOXC8P31273 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
HOXC8P31273 RNU6-1304P-201ENST00000411374 106 ntBASIC2.55□□□□□ -2
HOXC8P31273 AC074085.1-201ENST00000413598 418 ntBASIC2.55□□□□□ -2
HOXC8P31273 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.55□□□□□ -2
HOXC8P31273 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.55□□□□□ -2
HOXC8P31273 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXC8P31273 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC8P31273 CYP2C59P-201ENST00000457790 269 ntBASIC2.55□□□□□ -2
HOXC8P31273 Y_RNA.632-201ENST00000459189 102 ntBASIC2.55□□□□□ -2
HOXC8P31273 AC079140.5-201ENST00000507882 310 ntBASIC2.55□□□□□ -2
HOXC8P31273 AC092436.3-201ENST00000511788 257 ntBASIC2.55□□□□□ -2
HOXC8P31273 RPL39P5-202ENST00000512505 151 ntBASIC2.55□□□□□ -2
HOXC8P31273 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.55□□□□□ -2
HOXC8P31273 RNU6-559P-201ENST00000516151 98 ntBASIC2.55□□□□□ -2
HOXC8P31273 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.55□□□□□ -2
HOXC8P31273 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.55□□□□□ -2
HOXC8P31273 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.55□□□□□ -2
HOXC8P31273 AC026371.1-201ENST00000551867 419 ntBASIC2.55□□□□□ -2
HOXC8P31273 AC105137.2-201ENST00000569073 466 ntBASIC2.55□□□□□ -2
HOXC8P31273 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
HOXC8P31273 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.55□□□□□ -2
HOXC8P31273 ELOCP5-201ENST00000604924 333 ntBASIC2.55□□□□□ -2
HOXC8P31273 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.55□□□□□ -2
HOXC8P31273 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 492.7 ms