Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 HULC.1-201ENST00000612720 240 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
PTPN6P29350 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
PTPN6P29350 AP000560.1-201ENST00000624150 1937 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PTPN6P29350 RNU4-56P-201ENST00000364700 142 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 RNU6-1106P-201ENST00000390845 107 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 MIR1294-201ENST00000408503 142 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.86□□□□□ -2.11
PTPN6P29350 AL590135.1-201ENST00000422215 156 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC019205.3-201ENST00000424573 156 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AL591806.2-201ENST00000433122 173 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.86□□□□□ -2.11
PTPN6P29350 AC016700.2-201ENST00000446011 156 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.86□□□□□ -2.11
PTPN6P29350 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.86□□□□□ -2.11
PTPN6P29350 AC015911.1-201ENST00000495111 156 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC145146.1-201ENST00000496370 254 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.86□□□□□ -2.11
PTPN6P29350 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.86□□□□□ -2.11
PTPN6P29350 PTP4A1P4-201ENST00000512479 322 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 SNORA40.12-201ENST00000516329 111 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 RNU6-405P-201ENST00000516637 110 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.86□□□□□ -2.11
PTPN6P29350 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.86□□□□□ -2.11
PTPN6P29350 AC090115.3-201ENST00000553218 849 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 TRAV32-201ENST00000553993 340 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.86□□□□□ -2.11
PTPN6P29350 PIGPP4-201ENST00000584447 307 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AC017083.3-201ENST00000609955 700 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 AL359314.1-201ENST00000616913 261 ntBASIC1.86□□□□□ -2.11
PTPN6P29350 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.86□□□□□ -2.11
PTPN6P29350 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PTPN6P29350 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PTPN6P29350 RNU4-15P-201ENST00000362613 141 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 Y_RNA.51-201ENST00000362725 102 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 RNU6-142P-201ENST00000384019 107 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 SNORD14D-201ENST00000384390 87 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.85□□□□□ -2.11
PTPN6P29350 SRIP3-201ENST00000413200 219 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.85□□□□□ -2.11
PTPN6P29350 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.85□□□□□ -2.11
PTPN6P29350 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
PTPN6P29350 SNAP23P1-201ENST00000433229 246 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.85□□□□□ -2.11
PTPN6P29350 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.85□□□□□ -2.11
PTPN6P29350 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.85□□□□□ -2.11
PTPN6P29350 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.85□□□□□ -2.11
PTPN6P29350 CCDC34P1-201ENST00000507441 517 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.85□□□□□ -2.11
PTPN6P29350 AP005136.1-201ENST00000579765 429 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 AL356157.2-201ENST00000605122 111 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 MIR1248-201ENST00000629190 106 ntBASIC1.85□□□□□ -2.11
PTPN6P29350 AC233981.2-201ENST00000611524 1614 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PTPN6P29350 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
PTPN6P29350 Y_RNA.409-201ENST00000383990 98 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 POLHP1-201ENST00000411806 470 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.84□□□□□ -2.11
PTPN6P29350 EIF4EP2-201ENST00000422816 654 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AC078809.1-201ENST00000427601 140 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.84□□□□□ -2.11
PTPN6P29350 RPL7P54-201ENST00000438336 674 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.84□□□□□ -2.11
PTPN6P29350 RNU7-138P-201ENST00000459479 64 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 MTCO3P38-201ENST00000468910 766 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AC087884.1-201ENST00000469738 328 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 RPL38P4-201ENST00000502376 214 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 RNA5SP401-201ENST00000515920 127 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 OR11H5P-201ENST00000554039 926 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AC007375.1-201ENST00000554513 578 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.84□□□□□ -2.11
PTPN6P29350 AC015712.3-201ENST00000559380 164 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 BNIP3P25-201ENST00000596023 559 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 VN1R80P-201ENST00000597126 338 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.84□□□□□ -2.11
PTPN6P29350 AL078605.1-201ENST00000603529 500 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AP000654.2-201ENST00000605633 586 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AP001330.5-201ENST00000607176 411 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AC245008.1-201ENST00000608123 476 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
PTPN6P29350 AL158209.2-201ENST00000619266 216 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AC073534.2-201ENST00000620377 381 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.11
PTPN6P29350 MIR6863-201ENST00000636112 90 ntBASIC1.84□□□□□ -2.11
PTPN6P29350 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.84□□□□□ -2.11
PTPN6P29350 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
PTPN6P29350 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PTPN6P29350 MTND5P26-201ENST00000426018 1752 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
PTPN6P29350 RNU6-1322P-201ENST00000364309 107 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 SNORD32A-201ENST00000364805 84 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 RNU6-259P-201ENST00000383999 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms