Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.116-201ENST00000363292 103 ntBASIC4.49□□□□□ -1.69
VARSP26640 SNORD73B-201ENST00000364394 72 ntBASIC4.49□□□□□ -1.69
VARSP26640 SNORA18.2-201ENST00000383865 132 ntBASIC4.49□□□□□ -1.69
VARSP26640 PTMAP5-201ENST00000393073 333 ntBASIC4.49□□□□□ -1.69
VARSP26640 RN7SKP267-201ENST00000410381 285 ntBASIC4.49□□□□□ -1.69
VARSP26640 RNA5SP104-201ENST00000410989 118 ntBASIC4.49□□□□□ -1.69
VARSP26640 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.49□□□□□ -1.69
VARSP26640 RNU2-60P-201ENST00000517290 128 ntBASIC4.49□□□□□ -1.69
VARSP26640 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.49□□□□□ -1.69
VARSP26640 MIR3690-201ENST00000580266 75 ntBASIC4.49□□□□□ -1.69
VARSP26640 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VARSP26640 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.49□□□□□ -1.69
VARSP26640 MIR6758-201ENST00000620653 63 ntBASIC4.49□□□□□ -1.69
VARSP26640 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VARSP26640 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.49□□□□□ -1.69
VARSP26640 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.49□□□□□ -1.69
VARSP26640 AC018555.1-201ENST00000567548 1980 ntBASIC4.49□□□□□ -1.69
VARSP26640 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
VARSP26640 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.49□□□□□ -1.69
VARSP26640 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
VARSP26640 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
VARSP26640 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VARSP26640 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
VARSP26640 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.48□□□□□ -1.69
VARSP26640 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VARSP26640 RNU1-75P-201ENST00000347264 129 ntBASIC4.48□□□□□ -1.69
VARSP26640 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.48□□□□□ -1.69
VARSP26640 RNU6-880P-201ENST00000384526 107 ntBASIC4.48□□□□□ -1.69
VARSP26640 Y_RNA.587-201ENST00000391210 103 ntBASIC4.48□□□□□ -1.69
VARSP26640 Z98745.1-201ENST00000402553 494 ntBASIC4.48□□□□□ -1.69
VARSP26640 RNA5SP201-201ENST00000410316 124 ntBASIC4.48□□□□□ -1.69
VARSP26640 CRYBB2P1-203ENST00000415709 538 ntBASIC4.48□□□□□ -1.69
VARSP26640 CYCSP48-201ENST00000417124 323 ntBASIC4.48□□□□□ -1.69
VARSP26640 AL139281.1-201ENST00000422120 335 ntBASIC4.48□□□□□ -1.69
VARSP26640 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.48□□□□□ -1.69
VARSP26640 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.48□□□□□ -1.69
VARSP26640 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.48□□□□□ -1.69
VARSP26640 RNA5SP309-201ENST00000516670 106 ntBASIC4.48□□□□□ -1.69
VARSP26640 IGKV2D-19-201ENST00000523346 262 ntBASIC4.48□□□□□ -1.69
VARSP26640 EIF4A1P12-201ENST00000551910 141 ntBASIC4.48□□□□□ -1.69
VARSP26640 MIR4277-201ENST00000578298 84 ntBASIC4.48□□□□□ -1.69
VARSP26640 RPL30P11-203ENST00000598995 310 ntBASIC4.48□□□□□ -1.69
VARSP26640 uc_338.28-201ENST00000612082 187 ntBASIC4.48□□□□□ -1.69
VARSP26640 AC006133.1-201ENST00000617106 264 ntBASIC4.48□□□□□ -1.69
VARSP26640 MIR7703-201ENST00000620784 77 ntBASIC4.48□□□□□ -1.69
VARSP26640 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.48□□□□□ -1.69
VARSP26640 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.48□□□□□ -1.69
VARSP26640 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VARSP26640 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VARSP26640 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VARSP26640 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.48□□□□□ -1.69
VARSP26640 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VARSP26640 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
VARSP26640 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VARSP26640 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VARSP26640 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VARSP26640 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VARSP26640 RNU6-50P-201ENST00000362356 103 ntBASIC4.47□□□□□ -1.69
VARSP26640 SNORA70F-201ENST00000384142 135 ntBASIC4.47□□□□□ -1.69
VARSP26640 MIR1278-201ENST00000408753 81 ntBASIC4.47□□□□□ -1.69
VARSP26640 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.47□□□□□ -1.69
VARSP26640 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.47□□□□□ -1.69
VARSP26640 AC015795.1-201ENST00000513669 327 ntBASIC4.47□□□□□ -1.69
VARSP26640 RNU2-44P-201ENST00000516795 194 ntBASIC4.47□□□□□ -1.69
VARSP26640 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.47□□□□□ -1.69
VARSP26640 MIR4715-201ENST00000584117 79 ntBASIC4.47□□□□□ -1.69
VARSP26640 AC024220.1-201ENST00000603675 484 ntBASIC4.47□□□□□ -1.69
VARSP26640 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.47□□□□□ -1.69
VARSP26640 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.47□□□□□ -1.69
VARSP26640 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VARSP26640 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VARSP26640 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
VARSP26640 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.47□□□□□ -1.69
VARSP26640 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VARSP26640 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VARSP26640 AL513302.2-201ENST00000562313 1842 ntBASIC4.46□□□□□ -1.69
VARSP26640 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
VARSP26640 FAM35BP-202ENST00000497389 3337 ntBASIC4.46□□□□□ -1.69
VARSP26640 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VARSP26640 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VARSP26640 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VARSP26640 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.46□□□□□ -1.7
VARSP26640 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
VARSP26640 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
VARSP26640 MIR518C-201ENST00000384822 101 ntBASIC4.46□□□□□ -1.7
VARSP26640 MIR129-1-201ENST00000384972 72 ntBASIC4.46□□□□□ -1.7
VARSP26640 AL133475.1-201ENST00000404414 305 ntBASIC4.46□□□□□ -1.7
VARSP26640 RNU2-37P-201ENST00000410695 177 ntBASIC4.46□□□□□ -1.7
VARSP26640 Y_RNA.649-201ENST00000459077 103 ntBASIC4.46□□□□□ -1.7
VARSP26640 RNA5SP446-201ENST00000515955 82 ntBASIC4.46□□□□□ -1.7
VARSP26640 RNA5SP468-201ENST00000516782 93 ntBASIC4.46□□□□□ -1.7
VARSP26640 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.46□□□□□ -1.7
VARSP26640 AC106754.2-201ENST00000623006 233 ntBASIC4.46□□□□□ -1.7
VARSP26640 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.46□□□□□ -1.7
VARSP26640 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
VARSP26640 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.46□□□□□ -1.7
VARSP26640 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
VARSP26640 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.46□□□□□ -1.7
VARSP26640 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.46□□□□□ -1.7
VARSP26640 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms