Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU6-1012P-201ENST00000516606 109 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RPL23AP78-201ENST00000599928 470 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.2□□□□□ -1.9
POLR2AP24928 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.19□□□□□ -1.9
POLR2AP24928 Y_RNA.19-201ENST00000362462 99 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 RNU6-212P-201ENST00000362642 104 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 RNU6-200P-201ENST00000364743 107 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 SNORA46-201ENST00000384762 135 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 RPS29P13-201ENST00000402041 169 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 AC007560.1-201ENST00000426912 237 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 MTND2P29-201ENST00000438595 412 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 PIGFP3-201ENST00000441918 722 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 AC009237.8-201ENST00000445492 379 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 AC003982.1-202ENST00000469928 248 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2AP24928 Y_RNA.706-201ENST00000516933 99 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR2AP24928 U2.21-201ENST00000637295 81 ntBASIC3.19□□□□□ -1.9
POLR2AP24928 RNU4-90P-201ENST00000362773 141 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 MT-TC-201ENST00000387405 66 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 MIR764-201ENST00000390811 85 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AC096638.1-201ENST00000444678 216 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR2AP24928 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2AP24928 SCARNA15.2-201ENST00000516409 127 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AC034114.1-201ENST00000520293 285 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 MIR4782-201ENST00000577987 79 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AC008121.1-201ENST00000603244 268 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.18□□□□□ -1.9
POLR2AP24928 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2AP24928 ZNF72P-201ENST00000425869 1908 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR2AP24928 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2AP24928 RNU6-384P-201ENST00000364900 104 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 RNU6-1062P-201ENST00000383908 107 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 RNU6-1074P-201ENST00000383995 104 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AL138878.1-201ENST00000405131 347 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR2AP24928 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2AP24928 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2AP24928 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2AP24928 AL591043.1-201ENST00000432461 424 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2AP24928 Z82210.1-201ENST00000440037 231 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2AP24928 SNORD108-201ENST00000459332 71 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AC073901.1-201ENST00000462471 408 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 RPS23P5-201ENST00000495419 428 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 RNU7-4P-201ENST00000516961 62 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR2AP24928 DEFB122-202ENST00000569013 197 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AC004825.2-201ENST00000616634 455 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR2AP24928 U6.92-201ENST00000636464 89 ntBASIC3.18□□□□□ -1.9
POLR2AP24928 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR2AP24928 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2AP24928 Y_RNA.358-201ENST00000365491 99 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 AL117339.3-201ENST00000418733 162 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR2AP24928 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR2AP24928 RPL23AP14-201ENST00000468281 468 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 AF186996.7-201ENST00000492781 209 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR2AP24928 MIR2114-201ENST00000516645 80 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR2AP24928 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.17□□□□□ -1.9
POLR2AP24928 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR2AP24928 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR2AP24928 AC005046.1-201ENST00000608515 625 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 AL353748.2-201ENST00000622148 471 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 SCARNA4-201ENST00000629045 128 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 AC241585.2-209ENST00000638217 143 ntBASIC3.17□□□□□ -1.9
POLR2AP24928 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2AP24928 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2AP24928 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
POLR2AP24928 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
POLR2AP24928 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR2AP24928 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
POLR2AP24928 RNU1-76P-201ENST00000362903 159 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RNU6-827P-201ENST00000365553 106 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2AP24928 RNU6-217P-201ENST00000384164 104 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RNU6-17P-201ENST00000384245 107 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RNU6-18P-201ENST00000384527 107 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RNA5SP274-201ENST00000410484 108 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RNU6-1245P-201ENST00000411130 106 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2AP24928 MTATP6P7-201ENST00000453315 681 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR2AP24928 SCARNA24.2-201ENST00000516968 130 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RNU6-182P-201ENST00000516970 105 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2AP24928 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR2AP24928 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR2AP24928 LINC02555-201ENST00000563933 1951 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR2AP24928 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR2AP24928 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms