Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC3P19447 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC3P19447 RNU6-463P-201ENST00000384340 107 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 NDUFB4P4-201ENST00000404822 243 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 AL356968.1-201ENST00000416622 474 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 MTCYBP9-201ENST00000431021 303 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 NDUFB1P1-201ENST00000435191 180 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 AC115115.1-201ENST00000449927 248 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC3P19447 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.11□□□□□ -1.75
ERCC3P19447 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.11□□□□□ -1.75
ERCC3P19447 MTCO2P24-201ENST00000515611 426 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 RNU2-27P-201ENST00000516185 142 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 HSPE1P18-201ENST00000517602 280 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 AC093023.1-201ENST00000547375 507 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC3P19447 AC090517.1-201ENST00000569307 266 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 RMST_8.1-201ENST00000610287 165 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 MAPK10-322ENST00000641485 4530 ntBASIC4.11□□□□□ -1.75
ERCC3P19447 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ERCC3P19447 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.11□□□□□ -1.75
ERCC3P19447 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.1□□□□□ -1.75
ERCC3P19447 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ERCC3P19447 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ERCC3P19447 RNU6-378P-201ENST00000384324 107 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 Y_RNA.512-201ENST00000384518 102 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 Y_RNA.574-201ENST00000384766 95 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 AIMP1P2-201ENST00000425294 312 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.1□□□□□ -1.75
ERCC3P19447 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.1□□□□□ -1.75
ERCC3P19447 DYNLT3P2-201ENST00000442517 295 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 AC146507.2-201ENST00000460608 476 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 RN7SL807P-201ENST00000470923 297 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 AC145146.1-201ENST00000496370 254 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 PHBP14-201ENST00000512887 367 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.1□□□□□ -1.75
ERCC3P19447 AP002770.2-201ENST00000543613 532 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.1□□□□□ -1.75
ERCC3P19447 RPL30P11-203ENST00000598995 310 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 RAC1P9-201ENST00000604990 392 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.1□□□□□ -1.75
ERCC3P19447 U4.6-201ENST00000621618 127 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 U6.92-201ENST00000636464 89 ntBASIC4.1□□□□□ -1.75
ERCC3P19447 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.1□□□□□ -1.75
ERCC3P19447 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ERCC3P19447 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.09□□□□□ -1.75
ERCC3P19447 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ERCC3P19447 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.09□□□□□ -1.75
ERCC3P19447 RNU6-1301P-201ENST00000362724 104 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 RNU6-486P-201ENST00000363116 107 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 SNORD21-201ENST00000383953 95 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 MIR184-201ENST00000384962 84 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ERCC3P19447 U3.19-201ENST00000390893 196 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 SNORD17-201ENST00000390930 237 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.09□□□□□ -1.75
ERCC3P19447 snoU13.14-201ENST00000459372 104 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 AC010469.2-201ENST00000496412 480 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 SNORA25.14-201ENST00000516481 132 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 RNA5SP54-201ENST00000516951 92 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.09□□□□□ -1.75
ERCC3P19447 AC011476.5-201ENST00000615594 130 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.09□□□□□ -1.75
ERCC3P19447 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.09□□□□□ -1.75
ERCC3P19447 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.09□□□□□ -1.75
ERCC3P19447 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
ERCC3P19447 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC3P19447 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
ERCC3P19447 RNA5SP361-201ENST00000362686 118 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 RNU6-280P-201ENST00000364145 104 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 SET-203ENST00000372688 801 ntTSL 2 BASIC4.08□□□□□ -1.76
ERCC3P19447 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
ERCC3P19447 RNY3P4-201ENST00000384428 101 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 MIR10B-201ENST00000385011 110 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 MIR568-201ENST00000385036 95 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 SNORD78.2-201ENST00000391076 69 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 RNU6-159P-201ENST00000391080 106 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 RNU6-1109P-201ENST00000391187 107 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 RNU1-139P-201ENST00000391307 165 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 MIR320B2-201ENST00000408479 138 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 EIF4EP4-201ENST00000424916 578 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 EIF1P2-201ENST00000428233 350 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.08□□□□□ -1.76
ERCC3P19447 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.08□□□□□ -1.76
ERCC3P19447 AC091179.1-201ENST00000461606 579 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 AC034114.1-201ENST00000520293 285 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.08□□□□□ -1.76
ERCC3P19447 PRR13P7-201ENST00000605538 430 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC3P19447 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ERCC3P19447 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ERCC3P19447 GABRG2-229ENST00000641017 3628 ntBASIC4.08□□□□□ -1.76
ERCC3P19447 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
ERCC3P19447 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC3P19447 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.07□□□□□ -1.76
ERCC3P19447 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ERCC3P19447 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms