Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL109918.3-201ENST00000603072 338 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 AL132822.1-201ENST00000617063 513 ntBASIC1.83□□□□□ -2.12
XRCC1P18887 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
XRCC1P18887 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
XRCC1P18887 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
XRCC1P18887 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.83□□□□□ -2.12
XRCC1P18887 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
XRCC1P18887 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
XRCC1P18887 RNU6-1159P-201ENST00000362933 107 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 RNU6-428P-201ENST00000362942 107 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 RNU6-142P-201ENST00000384019 107 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
XRCC1P18887 RNU2-20P-201ENST00000410425 191 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 AL031274.1-201ENST00000450334 232 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 PPP1R2P5-201ENST00000457256 603 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 HMGB1P35-201ENST00000503360 598 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 AC091885.1-201ENST00000506658 268 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 AK3P2-201ENST00000507976 429 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 MTND3P5-201ENST00000512798 333 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.82□□□□□ -2.12
XRCC1P18887 AC104383.1-201ENST00000530297 370 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
XRCC1P18887 AC024909.2-201ENST00000553035 286 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 MTND1P15-201ENST00000579262 949 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 Z99129.1-201ENST00000612510 255 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 HULC.1-201ENST00000612720 240 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.82□□□□□ -2.12
XRCC1P18887 AC008555.8-201ENST00000623602 2168 ntBASIC1.82□□□□□ -2.12
XRCC1P18887 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
XRCC1P18887 RNU6-944P-201ENST00000364023 107 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 RNU4-56P-201ENST00000364700 142 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 RNU6-827P-201ENST00000365553 106 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
XRCC1P18887 RNU6-43P-201ENST00000384302 107 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 MIR676-201ENST00000390702 67 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 Y_RNA.597-201ENST00000410463 100 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 RN7SKP61-201ENST00000410642 295 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 SRIP3-201ENST00000413200 219 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 AC010975.2-201ENST00000427781 588 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.81□□□□□ -2.12
XRCC1P18887 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.81□□□□□ -2.12
XRCC1P18887 RNU7-138P-201ENST00000459479 64 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 SRRM1P2-201ENST00000464531 1192 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.81□□□□□ -2.12
XRCC1P18887 AC108210.2-201ENST00000503681 201 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.81□□□□□ -2.12
XRCC1P18887 AC007375.1-201ENST00000554513 578 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.81□□□□□ -2.12
XRCC1P18887 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
XRCC1P18887 AC107304.1-201ENST00000604229 296 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 RNU6-85P-201ENST00000605989 107 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 AC104073.3-201ENST00000610942 955 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 AC022202.1-201ENST00000613515 211 ntBASIC1.81□□□□□ -2.12
XRCC1P18887 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
XRCC1P18887 RNU6-692P-201ENST00000384496 107 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 MIR518A2-201ENST00000384966 87 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 RNU2-66P-201ENST00000410650 161 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.8□□□□□ -2.12
XRCC1P18887 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.8□□□□□ -2.12
XRCC1P18887 ARL5AP1-201ENST00000418991 388 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 SNAP23P1-201ENST00000433229 246 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 IFNA20P-201ENST00000436840 528 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AC244670.1-201ENST00000436879 112 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AL121601.2-201ENST00000438019 707 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 MTCO2P3-201ENST00000442543 421 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 MTND2P22-201ENST00000444325 1033 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 MTATP6P26-201ENST00000445926 662 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.8□□□□□ -2.12
XRCC1P18887 PMCHL2-203ENST00000457791 237 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 MTCO3P38-201ENST00000468910 766 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AC132942.1-201ENST00000486753 483 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.8□□□□□ -2.12
XRCC1P18887 AC107401.1-201ENST00000503426 685 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 HMGB3P17-201ENST00000504195 649 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 RNU6-237P-201ENST00000515985 71 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 SNORA14.1-201ENST00000516113 141 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 RNU6-548P-201ENST00000517083 115 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AK6P1-201ENST00000540219 478 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 MIR5583-1-201ENST00000580941 59 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AL034555.1-201ENST00000604816 211 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.8□□□□□ -2.12
XRCC1P18887 AL158209.2-201ENST00000619266 216 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 AC048344.4-201ENST00000619744 527 ntBASIC1.8□□□□□ -2.12
XRCC1P18887 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
XRCC1P18887 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
XRCC1P18887 AC092268.1-201ENST00000342691 405 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 RNU6-1085P-201ENST00000363576 107 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 RNA5SP219-201ENST00000390940 113 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 SNORD37.1-201ENST00000390968 65 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 MIR1294-201ENST00000408503 142 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 RNU2-16P-201ENST00000410712 136 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.79□□□□□ -2.12
XRCC1P18887 CYCSP49-201ENST00000420810 319 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 AL133396.1-201ENST00000432048 687 ntBASIC1.79□□□□□ -2.12
XRCC1P18887 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.79□□□□□ -2.12
XRCC1P18887 DNAJC19P4-201ENST00000440115 345 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 251.2 ms