Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SRIP3-201ENST00000413200 219 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AL590135.1-201ENST00000422215 156 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC019205.3-201ENST00000424573 156 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC002486.1-201ENST00000435098 391 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 DNAJC19P4-201ENST00000440115 345 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC007677.1-201ENST00000445757 515 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC016700.2-201ENST00000446011 156 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 RPS3AP17-201ENST00000472594 777 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC015911.1-201ENST00000495111 156 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AK3P2-201ENST00000507976 429 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC108078.1-201ENST00000508073 725 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC091133.4-201ENST00000511142 308 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 MRPS17P9-201ENST00000511924 393 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 RN7SKP298-201ENST00000515950 94 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 SNORA25.15-201ENST00000516487 89 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 Y_RNA.688-201ENST00000516565 95 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 RNU6-250P-201ENST00000516958 103 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC090115.3-201ENST00000553218 849 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 TRAV32-201ENST00000553993 340 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC010620.1-201ENST00000601088 1102 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AL078605.1-201ENST00000603529 500 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 HULC.1-201ENST00000612720 240 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 uc_338.34-201ENST00000617467 174 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC097520.1-201ENST00000624435 385 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 AC005609.4-201ENST00000625071 447 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 MTND4P23-201ENST00000447723 1363 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 Y_RNA.1-201ENST00000352915 104 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 RNU6-1141P-201ENST00000364520 107 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 SNORA26.9-201ENST00000391322 122 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AL158823.1-201ENST00000418441 478 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 CBX3P6-201ENST00000430257 527 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AL606489.2-201ENST00000433886 234 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AL163973.1-201ENST00000484753 577 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 RPL39P5-202ENST00000512505 151 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AC115990.1-201ENST00000526957 301 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AC103987.3-201ENST00000582071 292 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 MIR4298-201ENST00000584380 73 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 MIR4424-201ENST00000585257 86 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 RNU6-85P-201ENST00000605989 107 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 RN7SKP299-201ENST00000606679 301 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AL773524.1-201ENST00000614065 229 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 AC091932.3-201ENST00000624223 323 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 MTND4P14-201ENST00000435799 1354 ntBASIC1.43□□□□□ -2.18
HLA-DPB1P04440 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
HLA-DPB1P04440 Y_RNA.296-201ENST00000364930 108 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 SNORA8-201ENST00000384574 139 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 MIR29C-201ENST00000385231 88 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 SNORD73A-201ENST00000386062 65 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 SNORA40.19-201ENST00000390846 128 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 RNU11-3P-201ENST00000391111 133 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 RN7SKP101-201ENST00000411376 320 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC244670.1-201ENST00000436879 112 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 HMGB1P29-201ENST00000505659 499 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 RNU6-1038P-201ENST00000516516 104 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 HSPE1P4-201ENST00000550617 308 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 MTND1P15-201ENST00000579262 949 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC004223.2-201ENST00000590309 544 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC243960.4-201ENST00000600532 288 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC078795.3-201ENST00000602913 472 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC012507.3-201ENST00000603556 477 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 MIR502-201ENST00000606349 86 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC025754.2-201ENST00000606491 432 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 U2.17-201ENST00000611454 95 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AL450472.1-202ENST00000637286 180 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 AC008555.8-201ENST00000623602 2168 ntBASIC1.42□□□□□ -2.18
HLA-DPB1P04440 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DPB1P04440 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms