Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
RAF1P04049 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RAF1P04049 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
RAF1P04049 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RAF1P04049 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.36□□□□□ -2.03
RAF1P04049 Z75746.1-201ENST00000440243 2080 ntBASIC2.36□□□□□ -2.03
RAF1P04049 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.36□□□□□ -2.03
RAF1P04049 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RAF1P04049 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RAF1P04049 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RAF1P04049 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAF1P04049 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.35□□□□□ -2.03
RAF1P04049 RNU6-486P-201ENST00000363116 107 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RNU6-105P-201ENST00000363909 104 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RNU1-112P-201ENST00000364401 164 ntBASIC2.35□□□□□ -2.03
RAF1P04049 Y_RNA.482-201ENST00000384377 111 ntBASIC2.35□□□□□ -2.03
RAF1P04049 Y_RNA.535-201ENST00000384612 99 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RNU6-306P-201ENST00000384617 107 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RPS29P13-201ENST00000402041 169 ntBASIC2.35□□□□□ -2.03
RAF1P04049 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.35□□□□□ -2.03
RAF1P04049 MICF-203ENST00000432679 129 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RPS3P1-201ENST00000456781 192 ntBASIC2.35□□□□□ -2.03
RAF1P04049 AC006026.2-201ENST00000457376 180 ntBASIC2.35□□□□□ -2.03
RAF1P04049 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.35□□□□□ -2.03
RAF1P04049 Y_RNA.632-201ENST00000459189 102 ntBASIC2.35□□□□□ -2.03
RAF1P04049 AC090096.1-201ENST00000489168 390 ntBASIC2.35□□□□□ -2.03
RAF1P04049 AC018437.1-201ENST00000492214 406 ntBASIC2.35□□□□□ -2.03
RAF1P04049 ANXA2P1-201ENST00000505539 926 ntBASIC2.35□□□□□ -2.03
RAF1P04049 AC116337.1-201ENST00000509680 687 ntBASIC2.35□□□□□ -2.03
RAF1P04049 SMURF2P1-201ENST00000514992 481 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RNU6-559P-201ENST00000516151 98 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RNA5SP148-201ENST00000516527 94 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RNU5B-3P-201ENST00000516601 115 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
RAF1P04049 FRG2DP-202ENST00000566967 323 ntBASIC2.35□□□□□ -2.03
RAF1P04049 CPDP1-201ENST00000579660 283 ntBASIC2.35□□□□□ -2.03
RAF1P04049 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.35□□□□□ -2.03
RAF1P04049 AC009314.1-201ENST00000603871 304 ntBASIC2.35□□□□□ -2.03
RAF1P04049 AC097372.5-201ENST00000623665 376 ntBASIC2.35□□□□□ -2.03
RAF1P04049 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.35□□□□□ -2.03
RAF1P04049 MIR3529-201ENST00000637713 78 ntBASIC2.35□□□□□ -2.03
RAF1P04049 RBBP8P1-201ENST00000449447 1844 ntBASIC2.35□□□□□ -2.03
RAF1P04049 MTND4P23-201ENST00000447723 1363 ntBASIC2.35□□□□□ -2.03
RAF1P04049 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.35□□□□□ -2.03
RAF1P04049 AP006437.1-201ENST00000641440 3685 ntBASIC2.34□□□□□ -2.03
RAF1P04049 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RAF1P04049 RNU6-1317P-201ENST00000364582 104 ntBASIC2.34□□□□□ -2.03
RAF1P04049 XGY1-201ENST00000381172 446 ntBASIC2.34□□□□□ -2.03
RAF1P04049 Y_RNA.384-201ENST00000383909 102 ntBASIC2.34□□□□□ -2.03
RAF1P04049 RNU6-601P-201ENST00000384540 107 ntBASIC2.34□□□□□ -2.03
RAF1P04049 SNORA80E-201ENST00000384744 137 ntBASIC2.34□□□□□ -2.03
RAF1P04049 MIR517A-201ENST00000385001 87 ntBASIC2.34□□□□□ -2.03
RAF1P04049 RNU6-1106P-201ENST00000390845 107 ntBASIC2.34□□□□□ -2.03
RAF1P04049 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RAF1P04049 RNU6-1304P-201ENST00000411374 106 ntBASIC2.34□□□□□ -2.03
RAF1P04049 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.34□□□□□ -2.03
RAF1P04049 AC138623.1-201ENST00000418060 216 ntBASIC2.34□□□□□ -2.03
RAF1P04049 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.34□□□□□ -2.03
RAF1P04049 AC097463.2-201ENST00000421074 142 ntBASIC2.34□□□□□ -2.03
RAF1P04049 RPS15AP10-201ENST00000432472 382 ntBASIC2.34□□□□□ -2.03
RAF1P04049 AC112220.1-201ENST00000434628 355 ntBASIC2.34□□□□□ -2.03
RAF1P04049 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RAF1P04049 RPS12P2-201ENST00000439728 269 ntBASIC2.34□□□□□ -2.03
RAF1P04049 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.34□□□□□ -2.03
RAF1P04049 RPL9P9-202ENST00000466501 579 ntBASIC2.34□□□□□ -2.03
RAF1P04049 PTP4A1P4-201ENST00000512479 322 ntBASIC2.34□□□□□ -2.03
RAF1P04049 AC026782.1-201ENST00000512952 449 ntBASIC2.34□□□□□ -2.03
RAF1P04049 MIR4524B-201ENST00000581569 115 ntBASIC2.34□□□□□ -2.03
RAF1P04049 AC105245.1-201ENST00000581934 244 ntBASIC2.34□□□□□ -2.03
RAF1P04049 AC069294.1-201ENST00000608397 350 ntBASIC2.34□□□□□ -2.03
RAF1P04049 AL133215.3-201ENST00000609801 448 ntBASIC2.34□□□□□ -2.03
RAF1P04049 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.34□□□□□ -2.03
RAF1P04049 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RAF1P04049 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RAF1P04049 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
RAF1P04049 AC006026.1-201ENST00000444025 1803 ntBASIC2.33□□□□□ -2.04
RAF1P04049 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RAF1P04049 RNU6-527P-201ENST00000363425 104 ntBASIC2.33□□□□□ -2.04
RAF1P04049 Y_RNA.473-201ENST00000384333 102 ntBASIC2.33□□□□□ -2.04
RAF1P04049 SNORD116-29-201ENST00000384516 83 ntBASIC2.33□□□□□ -2.04
RAF1P04049 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RAF1P04049 RNU6-370P-201ENST00000411008 104 ntBASIC2.33□□□□□ -2.04
RAF1P04049 RNU6-293P-201ENST00000411259 106 ntBASIC2.33□□□□□ -2.04
RAF1P04049 RN7SKP192-201ENST00000411291 327 ntBASIC2.33□□□□□ -2.04
RAF1P04049 AC074117.2-201ENST00000417130 397 ntBASIC2.33□□□□□ -2.04
RAF1P04049 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.33□□□□□ -2.04
RAF1P04049 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.33□□□□□ -2.04
RAF1P04049 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.33□□□□□ -2.04
RAF1P04049 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
RAF1P04049 PCMTD1P1-201ENST00000455560 355 ntBASIC2.33□□□□□ -2.04
RAF1P04049 RPL23AP49-201ENST00000492925 468 ntBASIC2.33□□□□□ -2.04
RAF1P04049 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.33□□□□□ -2.04
RAF1P04049 RNU6-1016P-201ENST00000516689 94 ntBASIC2.33□□□□□ -2.04
RAF1P04049 RNU1-54P-201ENST00000517181 120 ntBASIC2.33□□□□□ -2.04
RAF1P04049 SNORA31.23-201ENST00000517219 133 ntBASIC2.33□□□□□ -2.04
RAF1P04049 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.33□□□□□ -2.04
RAF1P04049 APOOP3-201ENST00000536787 586 ntBASIC2.33□□□□□ -2.04
RAF1P04049 AC010186.2-204ENST00000537668 439 ntBASIC2.33□□□□□ -2.04
RAF1P04049 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.33□□□□□ -2.04
RAF1P04049 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms