Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TPRKBP2-201ENST00000565969 475 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.14□□□□□ -2.07
PDGFBP01127 APOOP1-201ENST00000604695 592 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AL357078.3-201ENST00000607528 618 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 RMST_4.1-201ENST00000616886 107 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC007792.1-201ENST00000623023 402 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC008555.8-201ENST00000623602 2168 ntBASIC2.14□□□□□ -2.07
PDGFBP01127 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PDGFBP01127 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
PDGFBP01127 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PDGFBP01127 RNU6-212P-201ENST00000362642 104 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 RNU6-827P-201ENST00000365553 106 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PDGFBP01127 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 RNU6-648P-201ENST00000410190 107 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 RNU2-23P-201ENST00000410545 195 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 POLHP1-201ENST00000411806 470 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 OR9R1P-201ENST00000412200 877 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AC074117.2-201ENST00000417130 397 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 TIMM9P3-201ENST00000428659 274 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.13□□□□□ -2.07
PDGFBP01127 NDUFA5P4-201ENST00000436704 385 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PDGFBP01127 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.13□□□□□ -2.07
PDGFBP01127 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.13□□□□□ -2.07
PDGFBP01127 snoU13.14-201ENST00000459372 104 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.13□□□□□ -2.07
PDGFBP01127 SNORA4.4-201ENST00000515921 135 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 SNORA25.17-201ENST00000517184 124 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.13□□□□□ -2.07
PDGFBP01127 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.13□□□□□ -2.07
PDGFBP01127 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.13□□□□□ -2.07
PDGFBP01127 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.13□□□□□ -2.07
PDGFBP01127 NDUFA5P6-201ENST00000542110 379 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AC025423.5-201ENST00000550230 219 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AC093249.1-201ENST00000567049 203 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AC090897.2-201ENST00000581715 130 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AL031274.2-201ENST00000599419 203 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AC146944.4-201ENST00000602697 718 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AL359821.1-201ENST00000605519 182 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AC092807.2-201ENST00000609367 243 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PDGFBP01127 AC009831.4-201ENST00000620744 325 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 RMST_7.1-201ENST00000621935 268 ntBASIC2.13□□□□□ -2.07
PDGFBP01127 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.13□□□□□ -2.07
PDGFBP01127 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.13□□□□□ -2.07
PDGFBP01127 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PDGFBP01127 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.13□□□□□ -2.07
PDGFBP01127 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
PDGFBP01127 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 Y_RNA.9-201ENST00000362354 101 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 RNU6-661P-201ENST00000362409 107 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 RNU6-1210P-201ENST00000363775 107 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 Y_RNA.402-201ENST00000383972 102 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 MIR544A-201ENST00000384855 91 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 RNU6-332P-201ENST00000391193 108 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 AL139156.1-201ENST00000412785 841 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.12□□□□□ -2.07
PDGFBP01127 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.12□□□□□ -2.07
PDGFBP01127 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.12□□□□□ -2.07
PDGFBP01127 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.12□□□□□ -2.07
PDGFBP01127 AK3P2-201ENST00000507976 429 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.12□□□□□ -2.07
PDGFBP01127 RPL39P5-202ENST00000512505 151 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 RNU6-189P-201ENST00000516120 101 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 SNORA31.23-201ENST00000517219 133 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PDGFBP01127 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.12□□□□□ -2.07
PDGFBP01127 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.12□□□□□ -2.07
PDGFBP01127 AC104576.1-201ENST00000524225 88 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 CENPUP1-201ENST00000526649 1202 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.12□□□□□ -2.07
PDGFBP01127 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.12□□□□□ -2.07
PDGFBP01127 MIR4424-201ENST00000585257 86 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 SNRPGP17-201ENST00000603780 214 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 Z69720.2-201ENST00000624755 279 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 MIR1321-201ENST00000637766 79 ntBASIC2.12□□□□□ -2.07
PDGFBP01127 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PDGFBP01127 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.11□□□□□ -2.07
PDGFBP01127 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.11□□□□□ -2.07
PDGFBP01127 RNY1P10-201ENST00000363268 113 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 Y_RNA.295-201ENST00000364918 102 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 Y_RNA.450-201ENST00000384198 113 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 Y_RNA.480-201ENST00000384364 102 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 MIR181A1-201ENST00000385026 110 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 RNU6-192P-201ENST00000391253 100 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 HMGN2P39-201ENST00000398005 273 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 AC019129.1-201ENST00000403786 261 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 RNU4-62P-201ENST00000410125 130 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 Y_RNA.619-201ENST00000410951 90 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 RNU6-293P-201ENST00000411259 106 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 SNORD56-201ENST00000413522 71 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.11□□□□□ -2.07
PDGFBP01127 RNA5SP233-201ENST00000459153 113 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.11□□□□□ -2.07
PDGFBP01127 RN7SKP256-201ENST00000517201 314 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 AC109635.3-201ENST00000529536 185 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms