Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 Z82205.1-201ENST00000428456 297 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 USP9YP30-201ENST00000430729 455 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 RPL21P2-201ENST00000440049 481 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 AC011816.1-201ENST00000441346 546 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.43□□□□□ -2.02
NKX2-2O95096 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX2-2O95096 RNA5SP282-201ENST00000516355 108 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 AC018630.3-201ENST00000542637 96 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 EIF4BP1-201ENST00000554881 351 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX2-2O95096 MTCO3P13-201ENST00000577757 781 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX2-2O95096 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.43□□□□□ -2.02
NKX2-2O95096 Z98751.3-201ENST00000604447 521 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 HMGB1P24-202ENST00000615653 685 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 U4atac.1-201ENST00000618345 95 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 AC090517.3-201ENST00000625170 141 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.43□□□□□ -2.02
NKX2-2O95096 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.43□□□□□ -2.02
NKX2-2O95096 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NKX2-2O95096 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NKX2-2O95096 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-2O95096 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-2O95096 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-2O95096 RNU6-968P-201ENST00000384076 107 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 SNORA29-201ENST00000384183 140 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 RNU6-601P-201ENST00000384540 107 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 RNA5SP201-201ENST00000410316 124 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 HMGB3P2-201ENST00000411913 584 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-2O95096 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-2O95096 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-2O95096 AL513124.1-201ENST00000450410 614 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-2O95096 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.42□□□□□ -2.02
NKX2-2O95096 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.42□□□□□ -2.02
NKX2-2O95096 Y_RNA.635-201ENST00000459041 101 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC008571.1-201ENST00000467232 300 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 CKS1BP2-201ENST00000497342 240 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-2O95096 FGF7P4-201ENST00000509595 295 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 CBX3P7-201ENST00000532876 502 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-2O95096 GTF3AP2-201ENST00000557014 266 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 CYP4A27P-201ENST00000567218 190 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 MIR3923-201ENST00000579521 83 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 LARP7P3-201ENST00000579888 337 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC011494.1-201ENST00000596454 237 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AL355297.2-201ENST00000604792 129 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC005520.5-201ENST00000613926 164 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC098657.3-201ENST00000620434 263 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC006386.2-201ENST00000624491 75 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AC012005.1-201ENST00000624575 75 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 AL008636.1-201ENST00000625038 1018 ntBASIC2.42□□□□□ -2.02
NKX2-2O95096 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-2O95096 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 SNORA80A-201ENST00000363922 136 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 Y_RNA.263-201ENST00000364659 114 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 RNU6-842P-201ENST00000384269 107 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 RPL19P1-201ENST00000411635 428 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 Z92545.1-201ENST00000411782 234 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.41□□□□□ -2.02
NKX2-2O95096 AC012306.1-201ENST00000423267 114 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 AC025750.2-201ENST00000442609 450 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 SNORD109B-201ENST00000458961 67 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 SNORD109A-201ENST00000459128 67 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 MTND4P17-201ENST00000470444 350 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.41□□□□□ -2.02
NKX2-2O95096 AC021146.2-201ENST00000504736 556 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.41□□□□□ -2.02
NKX2-2O95096 AC096725.1-201ENST00000514266 313 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 RNU6-507P-201ENST00000516045 100 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.41□□□□□ -2.02
NKX2-2O95096 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.41□□□□□ -2.02
NKX2-2O95096 MRPS36P4-201ENST00000534436 298 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.41□□□□□ -2.02
NKX2-2O95096 MIR5696-201ENST00000578474 85 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 RPL23AP88-201ENST00000605759 454 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 AC009994.1-201ENST00000606889 253 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 MIR7106-201ENST00000612419 65 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 MTND5P9-201ENST00000503854 1755 ntBASIC2.41□□□□□ -2.02
NKX2-2O95096 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.41□□□□□ -2.02
NKX2-2O95096 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NKX2-2O95096 AC233981.2-201ENST00000611524 1614 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 RNU6-1059P-201ENST00000363752 98 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 U8.9-201ENST00000365667 134 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 RNA5SP210-201ENST00000391034 120 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NKX2-2O95096 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 RPS26P42-201ENST00000413485 326 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 AL590556.1-201ENST00000423231 483 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX2-2O95096 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX2-2O95096 AC145146.1-201ENST00000496370 254 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX2-2O95096 AC005741.1-201ENST00000511094 432 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.4□□□□□ -2.03
NKX2-2O95096 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms