Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MIR6817-201ENST00000615588 66 ntBASIC2.4□□□□□ -2.03
PRKNO60260 HMGB1P24-202ENST00000615653 685 ntBASIC2.4□□□□□ -2.03
PRKNO60260 UCA1.1-201ENST00000620952 75 ntBASIC2.4□□□□□ -2.03
PRKNO60260 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PRKNO60260 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PRKNO60260 MTND5P10-201ENST00000603719 1809 ntBASIC2.4□□□□□ -2.03
PRKNO60260 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.39□□□□□ -2.03
PRKNO60260 AC009541.1-201ENST00000438279 2662 ntBASIC2.39□□□□□ -2.03
PRKNO60260 MIR449A-201ENST00000362113 91 ntBASIC2.39□□□□□ -2.03
PRKNO60260 SNORA75.6-201ENST00000391318 127 ntBASIC2.39□□□□□ -2.03
PRKNO60260 FO393413.1-201ENST00000402892 195 ntBASIC2.39□□□□□ -2.03
PRKNO60260 MIR1302-11-201ENST00000408051 138 ntBASIC2.39□□□□□ -2.03
PRKNO60260 MIR1302-9-201ENST00000408365 138 ntBASIC2.39□□□□□ -2.03
PRKNO60260 MIR1302-10-201ENST00000408734 138 ntBASIC2.39□□□□□ -2.03
PRKNO60260 AL118496.2-201ENST00000448300 230 ntBASIC2.39□□□□□ -2.03
PRKNO60260 AL441985.1-201ENST00000457727 251 ntBASIC2.39□□□□□ -2.03
PRKNO60260 AP001324.2-201ENST00000461163 319 ntBASIC2.39□□□□□ -2.03
PRKNO60260 RPL30P12-201ENST00000474666 353 ntBASIC2.39□□□□□ -2.03
PRKNO60260 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.39□□□□□ -2.03
PRKNO60260 RN7SL297P-201ENST00000483161 293 ntBASIC2.39□□□□□ -2.03
PRKNO60260 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.39□□□□□ -2.03
PRKNO60260 MRPS36P2-201ENST00000512569 299 ntBASIC2.39□□□□□ -2.03
PRKNO60260 CBX3P8-201ENST00000532412 525 ntBASIC2.39□□□□□ -2.03
PRKNO60260 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.39□□□□□ -2.03
PRKNO60260 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.39□□□□□ -2.03
PRKNO60260 AC090897.2-201ENST00000581715 130 ntBASIC2.39□□□□□ -2.03
PRKNO60260 AL080274.1-201ENST00000605565 220 ntBASIC2.39□□□□□ -2.03
PRKNO60260 MIR1302-2-201ENST00000607096 138 ntBASIC2.39□□□□□ -2.03
PRKNO60260 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.39□□□□□ -2.03
PRKNO60260 AC243829.7-201ENST00000633081 225 ntBASIC2.39□□□□□ -2.03
PRKNO60260 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKNO60260 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
PRKNO60260 RNU6-596P-201ENST00000365395 98 ntBASIC2.38□□□□□ -2.03
PRKNO60260 SNORD42.2-201ENST00000365570 69 ntBASIC2.38□□□□□ -2.03
PRKNO60260 RNU6-1040P-201ENST00000383974 107 ntBASIC2.38□□□□□ -2.03
PRKNO60260 RNU6-1227P-201ENST00000383981 107 ntBASIC2.38□□□□□ -2.03
PRKNO60260 RNU6-622P-201ENST00000384272 103 ntBASIC2.38□□□□□ -2.03
PRKNO60260 Y_RNA.533-201ENST00000384596 114 ntBASIC2.38□□□□□ -2.03
PRKNO60260 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PRKNO60260 AL591034.2-201ENST00000402839 359 ntBASIC2.38□□□□□ -2.03
PRKNO60260 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AC009963.1-201ENST00000417265 157 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.38□□□□□ -2.03
PRKNO60260 AL353997.1-201ENST00000432936 108 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AL031659.1-201ENST00000447075 539 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AC022493.2-201ENST00000506122 481 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AC091874.1-201ENST00000511402 339 ntBASIC2.38□□□□□ -2.03
PRKNO60260 RNA5SP320-201ENST00000516263 124 ntBASIC2.38□□□□□ -2.03
PRKNO60260 RNA5SP76-201ENST00000516277 87 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKNO60260 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.38□□□□□ -2.03
PRKNO60260 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.38□□□□□ -2.03
PRKNO60260 MIR3124-201ENST00000582636 67 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AC005899.2-201ENST00000584353 90 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.38□□□□□ -2.03
PRKNO60260 MIR6733-201ENST00000635723 61 ntBASIC2.38□□□□□ -2.03
PRKNO60260 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PRKNO60260 HAUS6P2-201ENST00000433254 2404 ntBASIC2.38□□□□□ -2.03
PRKNO60260 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PRKNO60260 Y_RNA.132-201ENST00000363421 102 ntBASIC2.37□□□□□ -2.03
PRKNO60260 RNU6-487P-201ENST00000365430 104 ntBASIC2.37□□□□□ -2.03
PRKNO60260 SNORD88.1-201ENST00000408684 91 ntBASIC2.37□□□□□ -2.03
PRKNO60260 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.37□□□□□ -2.03
PRKNO60260 AC138623.1-201ENST00000418060 216 ntBASIC2.37□□□□□ -2.03
PRKNO60260 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.37□□□□□ -2.03
PRKNO60260 MTCYBP6-201ENST00000441810 138 ntBASIC2.37□□□□□ -2.03
PRKNO60260 AC009296.1-201ENST00000443146 155 ntBASIC2.37□□□□□ -2.03
PRKNO60260 OSTCP8-201ENST00000445117 448 ntBASIC2.37□□□□□ -2.03
PRKNO60260 UBBP3-201ENST00000445497 241 ntBASIC2.37□□□□□ -2.03
PRKNO60260 RPL39P29-201ENST00000447779 157 ntBASIC2.37□□□□□ -2.03
PRKNO60260 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.37□□□□□ -2.03
PRKNO60260 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PRKNO60260 SCARNA15.1-201ENST00000516384 125 ntBASIC2.37□□□□□ -2.03
PRKNO60260 RNU5B-3P-201ENST00000516601 115 ntBASIC2.37□□□□□ -2.03
PRKNO60260 RNU6-307P-201ENST00000516743 106 ntBASIC2.37□□□□□ -2.03
PRKNO60260 AC026241.1-201ENST00000517873 2142 ntBASIC2.37□□□□□ -2.03
PRKNO60260 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.37□□□□□ -2.03
PRKNO60260 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.37□□□□□ -2.03
PRKNO60260 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.37□□□□□ -2.03
PRKNO60260 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.37□□□□□ -2.03
PRKNO60260 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PRKNO60260 RPS15AP11-201ENST00000594193 385 ntBASIC2.37□□□□□ -2.03
PRKNO60260 AL158827.2-201ENST00000602494 330 ntBASIC2.37□□□□□ -2.03
PRKNO60260 AL691447.3-201ENST00000635020 330 ntBASIC2.37□□□□□ -2.03
PRKNO60260 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.37□□□□□ -2.03
PRKNO60260 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
PRKNO60260 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PRKNO60260 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.36□□□□□ -2.03
PRKNO60260 MTND5P9-201ENST00000503854 1755 ntBASIC2.36□□□□□ -2.03
PRKNO60260 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.36□□□□□ -2.03
PRKNO60260 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PRKNO60260 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.36□□□□□ -2.03
PRKNO60260 SNORD50.1-201ENST00000362987 71 ntBASIC2.36□□□□□ -2.03
PRKNO60260 SNORA63-201ENST00000363450 132 ntBASIC2.36□□□□□ -2.03
PRKNO60260 Y_RNA.197-201ENST00000364004 102 ntBASIC2.36□□□□□ -2.03
PRKNO60260 SNORD56.5-201ENST00000364281 72 ntBASIC2.36□□□□□ -2.03
PRKNO60260 U3.13-201ENST00000364804 214 ntBASIC2.36□□□□□ -2.03
PRKNO60260 SNORD32A-201ENST00000364805 84 ntBASIC2.36□□□□□ -2.03
PRKNO60260 Y_RNA.445-201ENST00000384168 102 ntBASIC2.36□□□□□ -2.03
PRKNO60260 RNU6-474P-201ENST00000384243 107 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms