Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-1317P-201ENST00000364582 104 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 RNU6-933P-201ENST00000384424 107 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 Y_RNA.534-201ENST00000384599 112 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 MIR512-1-201ENST00000384913 84 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 MIR592-201ENST00000384959 97 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 AL591034.2-201ENST00000402839 359 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 AL603910.2-201ENST00000407268 136 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 Y_RNA.592-201ENST00000410274 109 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 RNU2-43P-201ENST00000410306 190 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 AL353621.1-201ENST00000418219 243 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
FOXN1O15353 AC245517.4-201ENST00000448601 281 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 SNORA70.14-201ENST00000516205 110 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 RNU6-911P-201ENST00000516523 104 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 RNA5SP148-201ENST00000516527 94 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXN1O15353 AL353748.2-201ENST00000622148 471 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 AL450472.1-202ENST00000637286 180 ntBASIC3.45□□□□□ -1.86
FOXN1O15353 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
FOXN1O15353 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.45□□□□□ -1.86
FOXN1O15353 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
FOXN1O15353 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
FOXN1O15353 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXN1O15353 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
FOXN1O15353 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXN1O15353 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
FOXN1O15353 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
FOXN1O15353 MIR335-201ENST00000362173 94 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 Y_RNA.54-201ENST00000362766 105 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 snoU2_19.2-201ENST00000363024 80 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 SNORA7.2-201ENST00000364446 145 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 Y_RNA.277-201ENST00000364754 102 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 RNU6-851P-201ENST00000384565 107 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 SNORD58.1-201ENST00000391313 66 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 PCNPP3-201ENST00000393579 471 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 AC007098.1-201ENST00000420122 367 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 AC009414.1-201ENST00000427200 443 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 HMGB1P27-201ENST00000431429 603 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 AC092573.2-201ENST00000434546 243 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 RPL36AP21-201ENST00000490372 323 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXN1O15353 SUMO2P6-201ENST00000505273 288 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 RNU1-86P-201ENST00000516108 154 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 RNU1-107P-201ENST00000516617 154 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 SNORA31.22-201ENST00000517204 135 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 DEFB108E-201ENST00000524692 240 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 AC126177.3-201ENST00000551839 688 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 MIR3133-201ENST00000583157 78 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 ZNF299P-201ENST00000406845 1804 ntBASIC3.44□□□□□ -1.86
FOXN1O15353 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
FOXN1O15353 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
FOXN1O15353 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXN1O15353 RPL9P7-201ENST00000330965 580 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RNU6-859P-201ENST00000362728 107 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RNU1-76P-201ENST00000362903 159 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RNU6-595P-201ENST00000363944 107 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 Y_RNA.352-201ENST00000365439 102 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 Y_RNA.458-201ENST00000384240 102 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RNU6-1179P-201ENST00000384667 107 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 MIR548I2-201ENST00000408348 149 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 TOMM22P1-201ENST00000418578 312 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 AC096920.1-201ENST00000423991 241 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 HMGN2P3-201ENST00000433603 273 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 HMGN2P5-201ENST00000436882 273 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RPL37P4-201ENST00000448908 268 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RPL9P9-202ENST00000466501 579 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.43□□□□□ -1.86
FOXN1O15353 AC008716.1-201ENST00000511084 513 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RNU6-255P-201ENST00000516957 105 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 RNU6-840P-201ENST00000517275 65 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.43□□□□□ -1.86
FOXN1O15353 MIR5696-201ENST00000578474 85 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 MIR4648-201ENST00000580107 72 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 Z75746.1-201ENST00000440243 2080 ntBASIC3.43□□□□□ -1.86
FOXN1O15353 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
FOXN1O15353 ADAM3A-203ENST00000461344 2157 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXN1O15353 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXN1O15353 AC004925.1-201ENST00000624256 2706 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 SNORA31-201ENST00000362607 130 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 SNORD6-201ENST00000365444 73 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 Y_RNA.355-201ENST00000365462 98 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 RNU6-662P-201ENST00000384253 104 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 RNU6-700P-201ENST00000391043 107 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 RNA5SP494-201ENST00000410653 129 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 AL139156.1-201ENST00000412785 841 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXN1O15353 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXN1O15353 AC022493.1-201ENST00000492984 337 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 AC005921.1-201ENST00000510589 286 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 RNU4-71P-201ENST00000516258 113 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 SNORA31.20-201ENST00000517111 133 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.42□□□□□ -1.86
FOXN1O15353 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXN1O15353 AC024153.1-201ENST00000603103 365 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 AC127459.3-201ENST00000624328 466 ntBASIC3.42□□□□□ -1.86
FOXN1O15353 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms