Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 U8.20-201ENST00000459445 131 ntBASIC3.55□□□□□ -1.84
PTPDC1A2A3K4 RPL22P13-201ENST00000493291 347 ntBASIC3.55□□□□□ -1.84
PTPDC1A2A3K4 MTCO2P24-201ENST00000515611 426 ntBASIC3.55□□□□□ -1.84
PTPDC1A2A3K4 AC040926.1-201ENST00000530195 238 ntBASIC3.55□□□□□ -1.84
PTPDC1A2A3K4 AL137790.1-201ENST00000634283 177 ntBASIC3.55□□□□□ -1.84
PTPDC1A2A3K4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPDC1A2A3K4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPDC1A2A3K4 AC010889.1-201ENST00000566193 2666 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 RNU6-874P-201ENST00000362390 105 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 Y_RNA.149-201ENST00000363558 117 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 RNU6-196P-201ENST00000384315 107 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 MTCYBP9-201ENST00000431021 303 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 Z82188.1-201ENST00000436709 154 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 AC091144.1-201ENST00000519573 138 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 AL355297.3-201ENST00000604082 446 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 PRR13P7-201ENST00000605538 430 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 RPL23AP88-201ENST00000605759 454 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 AC093732.2-201ENST00000607950 274 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 AC007318.2-201ENST00000620999 243 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 AC243829.7-201ENST00000633081 225 ntBASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPDC1A2A3K4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 MIR22-201ENST00000362190 85 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 Y_RNA.106-201ENST00000363189 100 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 MIR628-201ENST00000385229 95 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 RNU6-750P-201ENST00000390946 107 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 SNORA48.8-201ENST00000391324 134 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 MIR1252-201ENST00000408861 65 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 RN7SKP220-201ENST00000410611 288 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 RN7SKP61-201ENST00000410642 295 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 AL365496.1-201ENST00000426885 215 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 AC009296.1-201ENST00000443146 155 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 MTCO3P8-201ENST00000453691 755 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 SNRPGP7-201ENST00000469016 106 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 RPL30P1-201ENST00000488676 339 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 AC016632.1-201ENST00000503994 196 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 HSPE1P4-201ENST00000550617 308 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 AC007375.1-201ENST00000554513 578 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 AC025281.1-201ENST00000567026 265 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 AC010928.2-201ENST00000588017 287 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 AL021879.1-201ENST00000611756 288 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 SNORA43.4-201ENST00000629559 138 ntBASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTPDC1A2A3K4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 Y_RNA.152-201ENST00000363578 100 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 Y_RNA.176-201ENST00000363815 109 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 SNORA29-201ENST00000384183 140 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 MIR568-201ENST00000385036 95 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 RNA5SP274-201ENST00000410484 108 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 AC078809.1-201ENST00000427601 140 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 AC025750.2-201ENST00000442609 450 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 RPL39P29-201ENST00000447779 157 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 AL441985.1-201ENST00000457727 251 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 RN7SL633P-201ENST00000488974 297 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 Y_RNA.715-201ENST00000517082 110 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 IGHV3-76-201ENST00000522465 295 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 RNU6-91P-201ENST00000607774 107 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 RMST_6.1-201ENST00000611980 203 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 AC000403.1-201ENST00000613696 3585 ntBASIC3.52□□□□□ -1.85
PTPDC1A2A3K4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 GABRG2-229ENST00000641017 3628 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 Y_RNA.47-201ENST00000362697 108 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 SNORD115-32-201ENST00000364079 82 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 SNORA63.7-201ENST00000365579 123 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AC114482.1-201ENST00000418010 247 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 GPM6BP3-201ENST00000442797 145 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 RPL30P12-201ENST00000474666 353 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AF186996.7-201ENST00000492781 209 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 RN7SKP43-201ENST00000516173 320 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 RNU6-635P-201ENST00000516651 102 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 COX6CP5-201ENST00000527162 228 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 MIR5571-201ENST00000577998 113 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AL355877.2-201ENST00000603670 358 ntBASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PTPDC1A2A3K4 AC002543.1-201ENST00000299783 1954 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms