Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 AL358453.1-201ENST00000422522 250 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 AC012306.1-201ENST00000423267 114 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 AC091874.1-201ENST00000511402 339 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA31.6-201ENST00000516241 130 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 RN7SKP295-201ENST00000517264 153 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 AP003072.1-201ENST00000531740 145 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 MRPS36P4-201ENST00000534436 298 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 GNAI2P1-201ENST00000541815 315 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 AL138963.2-201ENST00000605137 226 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 AC091925.1-201ENST00000623204 462 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 AC243829.7-201ENST00000633081 225 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 Y_RNA.39-201ENST00000362620 98 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 U3.13-201ENST00000364804 214 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 Y_RNA.314-201ENST00000365114 102 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR153-2-201ENST00000385225 87 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 CBX3P9-201ENST00000402326 552 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 Z75741.1-201ENST00000446793 314 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 RN7SL283P-201ENST00000489055 303 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 HMGB1P35-201ENST00000503360 598 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 AC104027.1-201ENST00000521887 300 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 AC026333.2-201ENST00000542164 106 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR3923-201ENST00000579521 83 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 AC006504.6-201ENST00000590142 199 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORD98-201ENST00000636377 67 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 AC026241.1-201ENST00000517873 2142 ntBASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA3Q9Y5H0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR190B-201ENST00000401119 79 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU6-1140P-201ENST00000410517 106 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 RPS26P42-201ENST00000413485 326 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 PMCHL1-202ENST00000423102 261 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC092423.1-201ENST00000430165 186 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC009296.1-201ENST00000443146 155 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC087477.1-201ENST00000465747 340 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC090525.1-201ENST00000479116 478 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC096576.1-201ENST00000489014 359 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC021146.2-201ENST00000504736 556 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU5F-2P-201ENST00000516066 82 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU6-475P-201ENST00000516073 104 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU2-53P-201ENST00000516257 147 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR2355-201ENST00000517199 87 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 CYP4A27P-201ENST00000567218 190 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC010620.2-201ENST00000600135 313 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 AC073657.2-201ENST00000605661 303 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR7515-201ENST00000637837 67 ntBASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHGA3Q9Y5H0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 RNA5SP374-201ENST00000362939 125 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 SNORD21-201ENST00000383953 95 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.405-201ENST00000383979 100 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 RNU6-1032P-201ENST00000384100 107 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.451-201ENST00000384200 100 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.524-201ENST00000384564 100 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 Y_RNA.561-201ENST00000384694 100 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 U6atac.2-201ENST00000408644 118 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 MCFD2P1-201ENST00000417812 300 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 AL590556.1-201ENST00000423231 483 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 AIMP1P2-201ENST00000425294 312 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 HMGN1P18-201ENST00000457642 277 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 S100A11P2-201ENST00000467589 312 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 AL670379.2-201ENST00000604983 252 ntBASIC3.21□□□□□ -1.9
PCDHGA3Q9Y5H0 AL137843.1-201ENST00000605078 385 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms