Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AL133475.1-201ENST00000404414 305 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC018634.1-201ENST00000437554 401 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 SNORD65B-201ENST00000459126 73 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 RN7SKP46-201ENST00000515942 234 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-1149P-201ENST00000516810 97 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC107934.2-201ENST00000518653 310 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC024220.1-201ENST00000603675 484 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 HSPE1P7-201ENST00000604681 321 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC087385.3-201ENST00000620477 187 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 RNVU1-6-201ENST00000364688 164 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 COX6B1P1-201ENST00000415962 213 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 AC245291.1-201ENST00000419501 328 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 AC073261.1-201ENST00000429409 121 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 RPS29P10-201ENST00000439197 166 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 AC093663.1-201ENST00000497190 394 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 HSPE1P5-201ENST00000561489 272 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-91P-201ENST00000607774 107 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 MAPK10-286ENST00000641208 8747 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 AC025031.4-201ENST00000621248 3271 ntBASIC4.99□□□□□ -1.61
PCDHGA4Q9Y5G9 AL133412.1-201ENST00000380194 2992 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 AC080128.1-201ENST00000474389 1917 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-1209P-201ENST00000363655 107 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 Y_RNA.796-201ENST00000364268 102 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 Y_RNA.799-201ENST00000364992 102 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR600-201ENST00000385007 98 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR1182-201ENST00000408363 97 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 AC104333.2-201ENST00000422630 192 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 AL500522.2-201ENST00000448562 343 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 AC245102.2-201ENST00000448956 180 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 IGLV2-34-201ENST00000490007 283 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 AC022893.2-201ENST00000564832 3296 ntBASIC4.98□□□□□ -1.61
PCDHGA4Q9Y5G9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 RNA5SP513-201ENST00000364648 118 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 Y_RNA.265-201ENST00000364677 108 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-497P-201ENST00000365316 104 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR124-3-201ENST00000384866 87 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 AL590139.1-201ENST00000416267 400 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 AC005921.1-201ENST00000510589 286 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 AC091826.1-201ENST00000514065 313 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU2-13P-201ENST00000515909 113 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-830P-201ENST00000516353 107 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHGA4Q9Y5G9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA4Q9Y5G9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PCDHGA4Q9Y5G9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA4Q9Y5G9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA4Q9Y5G9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PCDHGA4Q9Y5G9 RNA5SP354-201ENST00000391247 136 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms