Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNY3P2-201ENST00000362918 102 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-776P-201ENST00000364403 104 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-335P-201ENST00000364563 113 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-1022P-201ENST00000365049 104 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-1240P-201ENST00000365155 104 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 Y_RNA.344-201ENST00000365381 112 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 UBBP2-201ENST00000376781 231 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 Z98745.1-201ENST00000402553 494 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 RN7SL329P-201ENST00000467740 299 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-63P-201ENST00000516690 95 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 HMGN2P6-201ENST00000551091 273 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 AC021739.1-201ENST00000559631 174 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 AC233702.9-201ENST00000581528 203 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 AC091905.4-201ENST00000623432 202 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 ZFRP1-201ENST00000457579 2970 ntBASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS9D1Q9Y2B5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 AC058791.1-201ENST00000608412 3198 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-979P-201ENST00000383896 107 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 Y_RNA.437-201ENST00000384113 113 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 MIR585-201ENST00000384887 94 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 AC018634.1-201ENST00000437554 401 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 AC080013.2-201ENST00000460866 323 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 RPL7AP6-201ENST00000477943 801 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 AC145146.1-201ENST00000496370 254 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 AC093663.1-201ENST00000497190 394 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-240P-201ENST00000516098 97 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 AP001781.1-201ENST00000530977 207 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 MIR4458-201ENST00000578872 75 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 SNRPGP15-201ENST00000600149 222 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 Mico1.1-201ENST00000611698 204 ntBASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
VPS9D1Q9Y2B5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 RN7SKP224-201ENST00000364140 325 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 SNORA1.3-201ENST00000384676 136 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 MIR181A2-201ENST00000384863 110 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 MIR562-201ENST00000384894 95 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 SNORA68.2-201ENST00000391263 128 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 RNA5SP511-201ENST00000410487 115 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 AL353689.1-201ENST00000438895 199 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 AL356535.1-201ENST00000440335 398 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 RN7SL346P-201ENST00000491561 294 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 AC010598.1-201ENST00000510378 103 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 RNU1-6P-201ENST00000516290 144 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 RNY4P20-201ENST00000516678 93 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 MIR5588-201ENST00000581890 63 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 MAPK10-349ENST00000641767 3661 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 AC000123.3-201ENST00000624029 4975 ntBASIC4.8□□□□□ -1.64
VPS9D1Q9Y2B5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-1181P-201ENST00000384191 106 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 RNU6-675P-201ENST00000384236 104 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 AC009237.10-201ENST00000414112 510 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 RPL39P25-201ENST00000449384 154 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 AC231760.1-201ENST00000498002 260 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 RNA5SP20-201ENST00000515976 84 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 RNA5SP108-201ENST00000605921 117 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 AL162726.3-218ENST00000636401 95 ntBASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
VPS9D1Q9Y2B5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VPS9D1Q9Y2B5 AC006971.1-201ENST00000407916 4486 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms