Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH9Q9ULB4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH9Q9ULB4 MIR3136-201ENST00000583498 78 ntBASIC1.65□□□□□ -2.15
CDH9Q9ULB4 AC008752.3-201ENST00000588113 712 ntBASIC1.65□□□□□ -2.15
CDH9Q9ULB4 BNIP3P16-201ENST00000589779 534 ntBASIC1.65□□□□□ -2.15
CDH9Q9ULB4 AC068944.2-201ENST00000610373 403 ntBASIC1.65□□□□□ -2.15
CDH9Q9ULB4 AL603755.1-201ENST00000619504 163 ntBASIC1.65□□□□□ -2.15
CDH9Q9ULB4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDH9Q9ULB4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CDH9Q9ULB4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH9Q9ULB4 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 SNORD32B-201ENST00000364460 84 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 RNU4-48P-201ENST00000365559 182 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 RNY3P10-201ENST00000384764 102 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AL357139.1-201ENST00000407792 426 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AL603825.1-201ENST00000438481 80 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AL360221.1-201ENST00000445989 335 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AL035666.1-201ENST00000446195 348 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 SNRPGP9-201ENST00000456025 225 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC022364.2-201ENST00000457963 554 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 RNA5SP269-201ENST00000459032 137 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC132942.1-201ENST00000486753 483 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC145146.1-201ENST00000496370 254 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 LRRC34P2-201ENST00000514850 553 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC060788.1-201ENST00000521318 469 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC012414.6-201ENST00000568241 401 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 MIR4703-201ENST00000577728 79 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AL590229.1-201ENST00000603497 542 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 RMST_6.1-201ENST00000611980 203 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 AC022418.1-201ENST00000624118 445 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 SNORD98-201ENST00000636377 67 ntBASIC1.64□□□□□ -2.15
CDH9Q9ULB4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CDH9Q9ULB4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDH9Q9ULB4 CBX3P1-201ENST00000325243 554 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU6-23P-201ENST00000363283 107 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU4-91P-201ENST00000364778 135 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU6-336P-201ENST00000364891 107 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU6-43P-201ENST00000384302 107 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 Y_RNA.480-201ENST00000384364 102 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU6-393P-201ENST00000384475 107 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 SNORA48.1-201ENST00000390879 135 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 SNORA67.6-201ENST00000391093 99 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 SNORA26.8-201ENST00000391306 124 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU6-248P-201ENST00000410720 107 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH9Q9ULB4 MTND2P18-201ENST00000419962 1030 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AL513185.2-201ENST00000425543 193 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AC013470.1-201ENST00000453438 462 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 MTCO2P6-201ENST00000463134 685 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AC010486.2-201ENST00000505572 483 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH9Q9ULB4 MTCO3P28-201ENST00000513351 515 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AL645939.4-201ENST00000604495 135 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AC123912.5-201ENST00000605470 343 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AC130454.1-201ENST00000622948 401 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.63□□□□□ -2.15
CDH9Q9ULB4 AP000560.1-201ENST00000624150 1937 ntBASIC1.63□□□□□ -2.15
CDH9Q9ULB4 RNU6-428P-201ENST00000362942 107 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 RNA5SP493-201ENST00000364115 91 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 RNA5SP363-201ENST00000365072 115 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.62□□□□□ -2.15
CDH9Q9ULB4 RNU6-142P-201ENST00000384019 107 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 RNU6-434P-201ENST00000384376 107 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 RNU6-456P-201ENST00000384493 107 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 RNU6-692P-201ENST00000384496 107 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 SNORA12-201ENST00000391162 147 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CDH9Q9ULB4 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 BX295541.1-201ENST00000417774 250 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH9Q9ULB4 AC133104.1-201ENST00000429100 218 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 AC244670.1-201ENST00000436879 112 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 AL031667.1-201ENST00000440222 725 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 PRPS1P1-201ENST00000445305 876 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH9Q9ULB4 SNRPGP7-201ENST00000469016 106 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 AC087884.1-201ENST00000469738 328 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH9Q9ULB4 MIR449C-201ENST00000516047 92 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 AC145350.1-201ENST00000567426 208 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 VN1R107P-201ENST00000601784 209 ntBASIC1.62□□□□□ -2.15
CDH9Q9ULB4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CDH9Q9ULB4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDH9Q9ULB4 Y_RNA.169-201ENST00000363745 96 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 RNU6-282P-201ENST00000365357 103 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 SNORD70.1-201ENST00000391007 85 ntBASIC1.61□□□□□ -2.15
CDH9Q9ULB4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms