Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
GDF3Q9NR23 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
GDF3Q9NR23 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.08□□□□□ -2.08
GDF3Q9NR23 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.08□□□□□ -2.08
GDF3Q9NR23 RNU6-212P-201ENST00000362642 104 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 RNU6-1210P-201ENST00000363775 107 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 Y_RNA.378-201ENST00000365652 113 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
GDF3Q9NR23 RPS29P13-201ENST00000402041 169 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 CBX3P9-201ENST00000402326 552 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 RNU6-293P-201ENST00000411259 106 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 POLHP1-201ENST00000411806 470 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 AL445646.1-201ENST00000431784 216 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 MTND3P21-201ENST00000433774 331 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.08□□□□□ -2.08
GDF3Q9NR23 AC091885.1-201ENST00000506658 268 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.08□□□□□ -2.08
GDF3Q9NR23 RNU6-189P-201ENST00000516120 101 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 RNU6-720P-201ENST00000516363 108 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 Y_RNA.704-201ENST00000516851 102 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 RNU6-295P-201ENST00000516901 104 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 IMMP1LP2-201ENST00000552954 492 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.08□□□□□ -2.08
GDF3Q9NR23 EIF1P4-201ENST00000572664 335 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.08□□□□□ -2.08
GDF3Q9NR23 AC103705.1-201ENST00000619013 241 ntBASIC2.08□□□□□ -2.08
GDF3Q9NR23 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
GDF3Q9NR23 RNU6-827P-201ENST00000365553 106 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 RNU1-148P-201ENST00000384472 162 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 RNU6-1222P-201ENST00000384615 107 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 AL591034.2-201ENST00000402839 359 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 RNU6-1068P-201ENST00000410958 103 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.07□□□□□ -2.08
GDF3Q9NR23 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.07□□□□□ -2.08
GDF3Q9NR23 AL031274.1-201ENST00000450334 232 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.07□□□□□ -2.08
GDF3Q9NR23 RPL30P1-201ENST00000488676 339 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.07□□□□□ -2.08
GDF3Q9NR23 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
GDF3Q9NR23 RNU6-314P-201ENST00000516574 104 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 SNORA48.11-201ENST00000517015 89 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 AC103996.1-201ENST00000555468 102 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.07□□□□□ -2.08
GDF3Q9NR23 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.07□□□□□ -2.08
GDF3Q9NR23 AC091135.1-201ENST00000585943 307 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 BNIP3P16-201ENST00000589779 534 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 VN1R107P-201ENST00000601784 209 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 AC008121.3-201ENST00000618726 433 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 AC098657.3-201ENST00000620434 263 ntBASIC2.07□□□□□ -2.08
GDF3Q9NR23 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
GDF3Q9NR23 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 RNU6-1285P-201ENST00000363480 105 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 RNU6-692P-201ENST00000384496 107 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 MIR514A2-201ENST00000385131 88 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 MIR514A3-201ENST00000385132 88 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 MIR524-201ENST00000385242 87 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 AL590002.1-201ENST00000406554 418 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 RNU6-908P-201ENST00000410160 94 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 RNU6-1245P-201ENST00000411130 106 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 AL353752.1-201ENST00000454946 260 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 HMGN2P23-201ENST00000456759 269 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 RNU7-138P-201ENST00000459479 64 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 RNU6-1281P-201ENST00000516223 105 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 RNU6-586P-201ENST00000517265 104 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 AL162413.1-201ENST00000603198 110 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 AC092747.3-201ENST00000603769 301 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 YWHAEP7-203ENST00000622054 312 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 AC068137.3-201ENST00000639191 341 ntBASIC2.06□□□□□ -2.08
GDF3Q9NR23 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
GDF3Q9NR23 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
GDF3Q9NR23 Y_RNA.3-201ENST00000362331 103 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 RNU1-23P-201ENST00000363361 144 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 Y_RNA.167-201ENST00000363735 109 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 SNORA26.9-201ENST00000391322 122 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.05□□□□□ -2.08
GDF3Q9NR23 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.05□□□□□ -2.08
GDF3Q9NR23 SEPT14P3-201ENST00000439401 183 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 AC124916.1-201ENST00000444020 547 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
GDF3Q9NR23 AL732372.2-207ENST00000445840 183 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 SEPT14P2-201ENST00000453405 183 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 AC018868.1-201ENST00000491307 315 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 Y_RNA.654-201ENST00000497848 106 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 AK3P2-201ENST00000507976 429 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 HMGB3P3-201ENST00000510526 400 ntBASIC2.05□□□□□ -2.08
GDF3Q9NR23 SEPT14P4-201ENST00000513445 186 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms