Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL121890.1-201ENST00000435457 205 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RTN4Q9NQC3 RPL23AP58-201ENST00000440453 469 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 AL450023.3-201ENST00000440592 271 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 AL161636.2-201ENST00000445179 927 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 RPS17P2-201ENST00000461663 408 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 RN7SL610P-201ENST00000463845 291 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 AC069240.1-201ENST00000548774 375 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.55□□□□□ -1.52
RTN4Q9NQC3 MIR4308-201ENST00000580634 81 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 AC087783.2-201ENST00000605070 562 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 AC110741.2-201ENST00000605278 268 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 MIR1248-201ENST00000629190 106 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 MAPK10-286ENST00000641208 8747 ntBASIC5.55□□□□□ -1.52
RTN4Q9NQC3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RTN4Q9NQC3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 SNORA48.5-201ENST00000391143 135 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 AL513477.1-202ENST00000417061 214 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 BX323845.1-201ENST00000432417 179 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 SNORD65B-201ENST00000459126 73 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 RN7SL443P-201ENST00000464331 290 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 HMGB3P3-201ENST00000510526 400 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 RN7SKP164-201ENST00000516138 266 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 AC140479.6-201ENST00000633535 357 ntBASIC5.54□□□□□ -1.52
RTN4Q9NQC3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.54□□□□□ -1.52
RTN4Q9NQC3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 RNU6-103P-201ENST00000363686 107 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 SNORA26.5-201ENST00000391215 123 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 AL392103.1-201ENST00000447000 198 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 AL691482.1-201ENST00000453255 87 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 RPS26P55-201ENST00000471178 356 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 RN7SL466P-201ENST00000497546 295 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 RNY3P16-201ENST00000516338 101 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 AC025647.1-201ENST00000517879 253 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 AC100767.1-201ENST00000528178 123 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.53□□□□□ -1.52
RTN4Q9NQC3 Y_RNA.802-201ENST00000614892 130 ntBASIC5.53□□□□□ -1.52
RTN4Q9NQC3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTN4Q9NQC3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTN4Q9NQC3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTN4Q9NQC3 RNU6-1205P-201ENST00000363625 106 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 RN7SKP113-201ENST00000363891 295 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 Y_RNA.293-201ENST00000364908 93 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 SNORD14D-201ENST00000384390 87 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 MTCO2P33-201ENST00000402100 465 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 RNA5SP113-201ENST00000410486 84 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 AC123900.1-201ENST00000420390 96 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 AC003685.2-201ENST00000422795 395 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 U8.19-201ENST00000459095 133 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTN4Q9NQC3 RNU7-116P-201ENST00000516940 62 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 AC013412.1-201ENST00000610687 192 ntBASIC5.52□□□□□ -1.53
RTN4Q9NQC3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.52□□□□□ -1.53
RTN4Q9NQC3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTN4Q9NQC3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTN4Q9NQC3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTN4Q9NQC3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 AC079741.1-201ENST00000321498 212 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 MIR600-201ENST00000385007 98 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 AL355796.1-201ENST00000406706 323 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 HLA-N-201ENST00000437516 135 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 HSPE1P21-201ENST00000438283 308 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 RN7SL738P-201ENST00000470264 297 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 RNU6-789P-201ENST00000517105 102 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 AC022559.1-201ENST00000520905 205 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTN4Q9NQC3 TNPO1P3-201ENST00000436471 2662 ntBASIC5.51□□□□□ -1.53
RTN4Q9NQC3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.5□□□□□ -1.53
RTN4Q9NQC3 MIR323A-201ENST00000362199 86 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 RNA5SP183-201ENST00000362452 119 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 RNU6-461P-201ENST00000364195 107 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 Y_RNA.238-201ENST00000364441 102 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms