Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SENP3Q9H4L4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SENP3Q9H4L4 RNA5SP339-201ENST00000390987 122 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 SNORA26.6-201ENST00000391256 115 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 AC015818.7-201ENST00000428754 109 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 RN7SL504P-201ENST00000494496 287 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 SNORA18.5-201ENST00000516616 101 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 IGLV3-17-201ENST00000519099 244 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 AC104027.1-201ENST00000521887 300 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 AC109583.2-201ENST00000617367 129 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
SENP3Q9H4L4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SENP3Q9H4L4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
SENP3Q9H4L4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.96□□□□□ -1.14
SENP3Q9H4L4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SENP3Q9H4L4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
SENP3Q9H4L4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 RNU6-936P-201ENST00000384005 107 ntBASIC7.95□□□□□ -1.14
SENP3Q9H4L4 MIR8066-201ENST00000617280 78 ntBASIC7.95□□□□□ -1.14
SENP3Q9H4L4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SENP3Q9H4L4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 RNU6-1321P-201ENST00000390905 107 ntBASIC7.94□□□□□ -1.14
SENP3Q9H4L4 FTLP19-201ENST00000433300 394 ntBASIC7.94□□□□□ -1.14
SENP3Q9H4L4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC7.94□□□□□ -1.14
SENP3Q9H4L4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SENP3Q9H4L4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 RNU6-330P-201ENST00000363015 107 ntBASIC7.93□□□□□ -1.14
SENP3Q9H4L4 RNA5SP113-201ENST00000410486 84 ntBASIC7.93□□□□□ -1.14
SENP3Q9H4L4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 AL021877.2-201ENST00000624442 10684 ntBASIC7.93□□□□□ -1.14
SENP3Q9H4L4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SENP3Q9H4L4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SENP3Q9H4L4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SENP3Q9H4L4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SENP3Q9H4L4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SENP3Q9H4L4 Y_RNA.36-201ENST00000362602 112 ntBASIC7.92□□□□□ -1.14
SENP3Q9H4L4 RN7SL604P-201ENST00000492589 296 ntBASIC7.92□□□□□ -1.14
SENP3Q9H4L4 MIR7703-201ENST00000620784 77 ntBASIC7.92□□□□□ -1.14
SENP3Q9H4L4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SENP3Q9H4L4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
SENP3Q9H4L4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SENP3Q9H4L4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SENP3Q9H4L4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 LINC01963-201ENST00000562038 3148 ntBASIC7.91□□□□□ -1.14
SENP3Q9H4L4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 SNORA67-201ENST00000384423 137 ntBASIC7.91□□□□□ -1.14
SENP3Q9H4L4 SNORD67.1-201ENST00000516618 108 ntBASIC7.91□□□□□ -1.14
SENP3Q9H4L4 PARP1P2-201ENST00000556806 195 ntBASIC7.91□□□□□ -1.14
SENP3Q9H4L4 CYCSP1-201ENST00000604815 315 ntBASIC7.91□□□□□ -1.14
SENP3Q9H4L4 MIR6717-201ENST00000622747 73 ntBASIC7.91□□□□□ -1.14
SENP3Q9H4L4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC7.91□□□□□ -1.14
SENP3Q9H4L4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
SENP3Q9H4L4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SENP3Q9H4L4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.9□□□□□ -1.14
SENP3Q9H4L4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SENP3Q9H4L4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SENP3Q9H4L4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SENP3Q9H4L4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.14
SENP3Q9H4L4 RNA5SP505-201ENST00000364748 108 ntBASIC7.9□□□□□ -1.14
SENP3Q9H4L4 RNA5SP91-201ENST00000390902 119 ntBASIC7.9□□□□□ -1.14
SENP3Q9H4L4 PTMAP2-201ENST00000397627 327 ntBASIC7.9□□□□□ -1.14
SENP3Q9H4L4 CST9LP2-201ENST00000437612 320 ntBASIC7.9□□□□□ -1.14
SENP3Q9H4L4 YWHAEP2-201ENST00000580066 112 ntBASIC7.9□□□□□ -1.14
SENP3Q9H4L4 YWHAEP3-201ENST00000582767 121 ntBASIC7.9□□□□□ -1.14
SENP3Q9H4L4 AC245060.5-201ENST00000610778 3293 ntBASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms