Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 snoU109.2-201ENST00000459316 135 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AC079140.5-201ENST00000507882 310 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 GNAI2P1-201ENST00000541815 315 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 ZNF519P2-201ENST00000557032 169 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 HMGB1P33-201ENST00000563485 527 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 MIR3941-201ENST00000582572 103 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AL670379.10-201ENST00000604330 253 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AL670379.9-201ENST00000605428 253 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AF250324.2-201ENST00000608299 610 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 uc_338.34-201ENST00000617467 174 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.324-201ENST00000365165 102 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 MIR676-201ENST00000390702 67 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 RNU6-780P-201ENST00000391030 104 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AL606923.1-201ENST00000406616 190 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 RNU6-648P-201ENST00000410190 107 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 C8orf59P1-201ENST00000429930 303 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 CALM1P1-201ENST00000442082 433 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 PRPS1P1-201ENST00000445305 876 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AC006026.2-201ENST00000457376 180 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 PMCHL2-203ENST00000457791 237 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 MED28P2-201ENST00000475771 317 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 RPL7P43-201ENST00000478876 753 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 SMURF2P1-201ENST00000514992 481 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.687-201ENST00000516558 91 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 RNU6-314P-201ENST00000516574 104 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AC016957.1-201ENST00000534895 309 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 CR383656.8-201ENST00000549046 145 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 BNIP3P6-201ENST00000549284 499 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 PSMA3P-201ENST00000555485 635 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.84□□□□□ -2.11
NXF3Q9H4D5 MIR5583-1-201ENST00000580941 59 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 RMST_7.1-201ENST00000621935 268 ntBASIC1.84□□□□□ -2.11
NXF3Q9H4D5 HAUS6P2-201ENST00000433254 2404 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 RNU6-1303P-201ENST00000364841 107 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 RNU6-1215P-201ENST00000384441 102 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 Y_RNA.516-201ENST00000384541 124 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AL512604.1-201ENST00000404812 257 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 RNU7-167P-201ENST00000459160 62 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC107032.1-201ENST00000485945 480 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 CCDC34P1-201ENST00000507441 517 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.83□□□□□ -2.12
NXF3Q9H4D5 SNORA43.2-201ENST00000516652 128 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 SNORA25.17-201ENST00000517184 124 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.83□□□□□ -2.12
NXF3Q9H4D5 MTND4P7-201ENST00000523876 130 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AL157687.1-201ENST00000554853 619 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.83□□□□□ -2.12
NXF3Q9H4D5 TPRKBP2-201ENST00000565969 475 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC012557.2-201ENST00000605919 418 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC008121.3-201ENST00000618726 433 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 AC026585.1-201ENST00000619582 524 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 Z69720.2-201ENST00000624755 279 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.83□□□□□ -2.12
NXF3Q9H4D5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
NXF3Q9H4D5 MTND4P23-201ENST00000447723 1363 ntBASIC1.83□□□□□ -2.12
NXF3Q9H4D5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 Y_RNA.372-201ENST00000365599 102 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 RNU6-38P-201ENST00000384085 107 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 RNU6-483P-201ENST00000384088 108 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 RNU6-843P-201ENST00000384454 104 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 MIR95-201ENST00000385072 81 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AL590002.1-201ENST00000406554 418 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 SEPT14P3-201ENST00000439401 183 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC009238.1-201ENST00000442165 424 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AL732372.2-207ENST00000445840 183 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC009237.6-201ENST00000446969 424 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 SEPT14P2-201ENST00000453405 183 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 RNU6-333P-201ENST00000459117 107 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 RN7SKP210-201ENST00000459176 261 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 MTCO3P38-201ENST00000468910 766 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC091885.1-201ENST00000506658 268 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 MTCYBP40-201ENST00000509390 1135 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 SEPT14P4-201ENST00000513445 186 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 RNA5SP401-201ENST00000515920 127 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms