Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-4Q9BYR3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC005005.4-201ENST00000623789 16698 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 LPAL2-203ENST00000454031 2498 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC023245.2-201ENST00000530760 2978 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AL591135.1-201ENST00000401578 5914 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR103A2-201ENST00000362154 78 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 Y_RNA.250-201ENST00000364542 110 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP85-201ENST00000365378 119 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA64.3-201ENST00000365647 134 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA24-201ENST00000384096 131 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA80E-201ENST00000384744 137 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP53-201ENST00000391299 120 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AL590143.1-201ENST00000405071 138 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AL009179.1-201ENST00000406085 265 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AL033519.1-201ENST00000407266 307 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR1267-201ENST00000408723 78 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-1328P-201ENST00000410938 106 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SKP207-201ENST00000411204 303 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RPL36P1-201ENST00000419720 225 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AL606490.4-201ENST00000423117 127 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AL139132.1-201ENST00000431587 344 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 KRTAP8-2P-201ENST00000440620 186 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SS18L2P1-201ENST00000445923 213 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC125238.1-201ENST00000448842 249 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL870P-201ENST00000460111 296 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ABCC13-202ENST00000463099 3842 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL390P-201ENST00000470634 284 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 NIP7P2-201ENST00000485801 544 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-1095P-201ENST00000516148 108 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP473-201ENST00000516402 125 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORD45.4-201ENST00000516629 73 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 IGHV7-34-1-201ENST00000519200 350 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AP005597.2-201ENST00000526238 341 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC140063.1-201ENST00000541343 259 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC090022.1-201ENST00000546569 311 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC138749.4-201ENST00000563970 127 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MTND6P33-201ENST00000571794 183 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR4753-201ENST00000585119 83 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 HMGN2P15-201ENST00000585707 270 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC092032.1-201ENST00000603090 165 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORD96A-201ENST00000606577 79 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 FAM27B-201ENST00000610601 213 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms