Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC093852.1-201ENST00000503587 266 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 MTND1P19-201ENST00000511780 315 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 CBX3P8-201ENST00000532412 525 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 MIR2682-201ENST00000580305 110 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 MIR3128-201ENST00000581957 66 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 AL158827.2-201ENST00000602494 330 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 AL355877.2-201ENST00000603670 358 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 AC009314.1-201ENST00000603871 304 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 AL691447.3-201ENST00000635020 330 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 MAPK10-322ENST00000641485 4530 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.26-201ENST00000362539 101 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.60-201ENST00000362831 98 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 RNU6-487P-201ENST00000365430 104 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.376-201ENST00000365638 108 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 SNORD116-20-201ENST00000384529 92 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 RNU2-49P-201ENST00000410666 184 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 RPL21P40-201ENST00000428586 483 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 TRAV32-201ENST00000553993 340 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 AC007375.1-201ENST00000554513 578 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 RNU6-91P-201ENST00000607774 107 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 AC107294.3-201ENST00000609211 526 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 AL590808.1-201ENST00000618696 141 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 AC024581.2-201ENST00000619986 252 ntBASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRFN3Q9BTN0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 RNY1P16-201ENST00000363063 111 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 RNU6-105P-201ENST00000363909 104 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 RNU6-806P-201ENST00000365147 105 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 RNU6-843P-201ENST00000384454 104 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 RNU6-790P-201ENST00000384479 105 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.551-201ENST00000384661 102 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 RNU2-38P-201ENST00000410856 79 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 IFNA11P-201ENST00000446352 526 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 RNU7-170P-201ENST00000459303 61 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AL049830.2-201ENST00000480072 201 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC025554.1-201ENST00000505641 188 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC103996.1-201ENST00000555468 102 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC015712.3-201ENST00000559380 164 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC006600.1-201ENST00000572529 153 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC091152.3-201ENST00000604227 325 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 RAC1P9-201ENST00000604990 392 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC005046.1-201ENST00000608515 625 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 AC000403.1-201ENST00000613696 3585 ntBASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.14-201ENST00000362415 103 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.64-201ENST00000362845 102 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 MIR147B-201ENST00000390185 80 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 Z98941.1-201ENST00000407764 100 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 RNU6-325P-201ENST00000411132 105 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AC074117.2-201ENST00000417130 397 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AL358075.3-201ENST00000426289 226 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AL353705.1-201ENST00000433468 480 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 OR2AQ1P-201ENST00000451972 200 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 MTCO3P8-201ENST00000453691 755 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AC069499.1-201ENST00000489433 509 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AC008413.1-201ENST00000511864 177 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AC010265.1-201ENST00000513509 211 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 SNORA25.11-201ENST00000515935 105 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 ACA59.1-201ENST00000515966 143 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 RNU6-1023P-201ENST00000516137 106 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 RNU5B-3P-201ENST00000516601 115 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 RNU7-4P-201ENST00000516961 62 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 RN7SKP40-201ENST00000517211 242 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 HSPE1P20-201ENST00000538133 289 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 MIR4273-201ENST00000582824 84 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AL391813.1-201ENST00000603098 260 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AL356157.2-201ENST00000605122 111 ntBASIC3.35□□□□□ -1.87
LRFN3Q9BTN0 AC096772.1-201ENST00000609146 564 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms