Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 snoU13.6-201ENST00000458785 104 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AC105137.1-201ENST00000484355 562 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 RPL29P14-201ENST00000495837 428 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP196-201ENST00000625967 102 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 Y_RNA.217-201ENST00000364214 105 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 MIR134-201ENST00000385258 73 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 PTGES3P4-201ENST00000426243 356 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 snoU13.28-201ENST00000459235 104 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-625P-201ENST00000459412 107 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 Y_RNA.641-201ENST00000459414 105 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 AC107626.1-201ENST00000471084 183 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 RN7SL604P-201ENST00000492589 296 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-346P-201ENST00000516288 111 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 AC106785.1-201ENST00000565935 262 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 AC025627.2-201ENST00000576220 160 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 MIR3136-201ENST00000583498 78 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 HMGN2P15-201ENST00000585707 270 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 AC005828.6-201ENST00000606610 232 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 AC104465.1-201ENST00000611365 139 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 RBBP8P1-201ENST00000449447 1844 ntBASIC4.05□□□□□ -1.76
TRIM56Q9BRZ2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 Y_RNA.179-201ENST00000363844 90 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 RNU1-13P-201ENST00000384499 162 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP317-201ENST00000410176 116 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP311-201ENST00000411290 116 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 HMGB1P37-201ENST00000439613 609 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP315-201ENST00000516340 116 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP143-201ENST00000516936 115 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP312-201ENST00000517068 116 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 MTND5P41-201ENST00000517498 206 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 MIR5692C2-201ENST00000577959 77 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 AL356575.1-201ENST00000603008 283 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 AC024220.1-201ENST00000603675 484 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 MIR6868-201ENST00000611215 58 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 MIR486-1-201ENST00000612171 68 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 AL357075.2-201ENST00000614906 189 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 MTND5P35-201ENST00000557537 1720 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 UBE3AP2-201ENST00000429033 2259 ntBASIC4.04□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP399-201ENST00000364003 117 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RNU4-56P-201ENST00000364700 142 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RNU1-64P-201ENST00000365443 163 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-245P-201ENST00000384020 107 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-1248P-201ENST00000391096 64 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 AC096649.2-201ENST00000416186 393 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 OOSP1P1-201ENST00000423265 274 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 AC024067.1-201ENST00000426199 223 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 AL591419.1-201ENST00000427423 339 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RPS15AP5-201ENST00000436276 388 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-1219P-201ENST00000516143 112 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RNY3P16-201ENST00000516338 101 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 MIR4308-201ENST00000580634 81 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 AC025946.2-201ENST00000603398 234 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 MIR8059-201ENST00000620427 81 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 MTND1P7-201ENST00000632801 297 ntBASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
TRIM56Q9BRZ2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AC092593.1-201ENST00000515413 1815 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AL359837.1-201ENST00000381357 287 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 Y_RNA.398-201ENST00000383952 99 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 Y_RNA.441-201ENST00000384123 112 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-1310P-201ENST00000384153 107 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 Y_RNA.498-201ENST00000384460 102 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-19P-201ENST00000384718 107 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 MIR23A-201ENST00000385245 73 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 MIR320B2-201ENST00000408479 138 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms