Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL353705.1-201ENST00000433468 480 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 SNORD65B-201ENST00000459126 73 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 SNORA18.4-201ENST00000516440 124 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 RNU5F-4P-201ENST00000516581 114 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 RNU6-63P-201ENST00000516690 95 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.42□□□□□ -1.7
USB1Q9BQ65 AC018630.3-201ENST00000542637 96 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 AC097639.2-201ENST00000603159 172 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 uc_338.4-201ENST00000616635 176 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
USB1Q9BQ65 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.42□□□□□ -1.7
USB1Q9BQ65 MAPK10-286ENST00000641208 8747 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
USB1Q9BQ65 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
USB1Q9BQ65 AC068647.1-201ENST00000489539 2265 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
USB1Q9BQ65 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
USB1Q9BQ65 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 AC010889.1-201ENST00000566193 2666 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 RN7SKP103-201ENST00000363848 320 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 Y_RNA.281-201ENST00000364774 94 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 RNU6-294P-201ENST00000364999 102 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 SNORA12.1-201ENST00000390873 148 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 RN7SKP16-201ENST00000410180 299 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 RPS29P9-201ENST00000440360 171 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 AC023449.1-201ENST00000454464 154 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 RNA5SP20-201ENST00000515976 84 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 SNORD77.4-201ENST00000516158 81 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 RNA5SP43-201ENST00000516559 110 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 RNU6-1098P-201ENST00000516772 96 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 AC027419.1-201ENST00000522976 328 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 MIR4691-201ENST00000583764 85 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 AL020997.2-201ENST00000602607 184 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 HSPE1P7-201ENST00000604681 321 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 SCN1A-220ENST00000641603 12506 ntBASIC4.41□□□□□ -1.7
USB1Q9BQ65 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USB1Q9BQ65 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.41□□□□□ -1.7
USB1Q9BQ65 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
USB1Q9BQ65 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
USB1Q9BQ65 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.4□□□□□ -1.7
USB1Q9BQ65 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.4□□□□□ -1.7
USB1Q9BQ65 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.7
USB1Q9BQ65 Y_RNA.52-201ENST00000362760 96 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 RNU4-13P-201ENST00000364019 141 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 RNU6-1107P-201ENST00000364817 104 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 Y_RNA.348-201ENST00000365403 103 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 RNA5SP167-201ENST00000365461 116 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 SNORD14D-201ENST00000384390 87 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USB1Q9BQ65 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USB1Q9BQ65 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC112771.1-201ENST00000463581 102 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC010469.1-201ENST00000463864 576 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.4□□□□□ -1.71
USB1Q9BQ65 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC006349.1-201ENST00000555526 235 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC105245.1-201ENST00000581934 244 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.4□□□□□ -1.71
USB1Q9BQ65 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.4□□□□□ -1.71
USB1Q9BQ65 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 AL450345.1-202ENST00000605741 3881 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 AC000403.1-201ENST00000613696 3585 ntBASIC4.4□□□□□ -1.71
USB1Q9BQ65 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.39□□□□□ -1.71
USB1Q9BQ65 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
USB1Q9BQ65 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USB1Q9BQ65 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
USB1Q9BQ65 MAPK10-320ENST00000641462 6696 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.39□□□□□ -1.71
USB1Q9BQ65 MIR181A2-201ENST00000384863 110 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 SNORA26.2-201ENST00000390922 122 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 SNORD72-201ENST00000390994 80 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 SNORA26-201ENST00000391286 122 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 MIR1263-201ENST00000408324 86 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 RNA5SP511-201ENST00000410487 115 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 AL590762.4-201ENST00000425885 253 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.39□□□□□ -1.71
USB1Q9BQ65 PSMD10P3-201ENST00000437000 448 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms