Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 MTCO3P7-201ENST00000510008 774 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AC108729.3-201ENST00000513484 108 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 RNU6-677P-201ENST00000516914 101 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AC021231.3-201ENST00000558497 370 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 MIR3136-201ENST00000583498 78 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 OR4G2P-201ENST00000328113 903 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 RNY1P10-201ENST00000363268 113 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 SNORA32.2-201ENST00000384049 122 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 MIR544A-201ENST00000384855 91 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
AP1S3Q96PC3 MIR320C1-201ENST00000408566 88 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 Y_RNA.595-201ENST00000410403 105 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 MTCO3P29-201ENST00000432119 779 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.31□□□□□ -2.36
AP1S3Q96PC3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.31□□□□□ -2.36
AP1S3Q96PC3 RPL39P38-201ENST00000467018 153 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC104806.1-201ENST00000508720 308 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC068790.6-201ENST00000602558 258 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 DEFB131E-202ENST00000602581 683 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC016727.2-201ENST00000603988 621 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC136475.10-201ENST00000620253 385 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC097372.5-201ENST00000623665 376 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC009541.1-201ENST00000438279 2662 ntBASIC0.31□□□□□ -2.36
AP1S3Q96PC3 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
AP1S3Q96PC3 RNU6-511P-201ENST00000363496 107 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 RNU6-609P-201ENST00000365459 107 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 RNU5E-6P-201ENST00000365574 115 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 MIR578-201ENST00000384828 96 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 MIR942-201ENST00000401111 86 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 COX6CP10-201ENST00000416832 224 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC060773.1-201ENST00000421698 310 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.3□□□□□ -2.36
AP1S3Q96PC3 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC018659.1-201ENST00000551083 169 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC090888.2-201ENST00000559765 1144 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.3□□□□□ -2.36
AP1S3Q96PC3 MIR4709-201ENST00000577272 72 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC110760.3-201ENST00000598794 467 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 MTATP6P2-201ENST00000603319 678 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AL034555.1-201ENST00000604816 211 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 BCRP9-201ENST00000605312 388 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC021506.2-201ENST00000612354 169 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC008147.4-201ENST00000617570 1204 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AP002782.1-201ENST00000623107 614 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 SCARNA4-202ENST00000625402 129 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 AC092104.1-201ENST00000497346 1441 ntBASIC0.3□□□□□ -2.36
AP1S3Q96PC3 RNA5SP347-201ENST00000362445 119 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 RNU6-438P-201ENST00000365561 103 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 RNU6-945P-201ENST00000383947 107 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.29□□□□□ -2.36
AP1S3Q96PC3 AC245047.7-201ENST00000440265 293 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.29□□□□□ -2.36
AP1S3Q96PC3 AC092991.1-201ENST00000477176 376 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 MTND3P5-201ENST00000512798 333 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 RNU1-86P-201ENST00000516108 154 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 RNU1-107P-201ENST00000516617 154 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 RNU6-1098P-201ENST00000516772 96 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 RNA5SP102-201ENST00000516865 106 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.29□□□□□ -2.36
AP1S3Q96PC3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.29□□□□□ -2.36
AP1S3Q96PC3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.29□□□□□ -2.36
AP1S3Q96PC3 AC004987.4-201ENST00000603383 338 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 AC012507.3-201ENST00000603556 477 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 AC006927.2-201ENST00000639256 389 ntBASIC0.29□□□□□ -2.36
AP1S3Q96PC3 RNU6-1123P-201ENST00000362347 106 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 RNU6-78P-201ENST00000362897 107 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 Y_RNA.192-201ENST00000363977 102 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 RNY3P13-201ENST00000365542 102 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 RN7SKP266-201ENST00000410232 287 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 RNU6-321P-201ENST00000410912 106 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 MTCO1P21-201ENST00000416634 589 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 Z73417.1-201ENST00000447373 778 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 SNRPFP3-201ENST00000457792 225 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.28□□□□□ -2.36
AP1S3Q96PC3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.28□□□□□ -2.36
AP1S3Q96PC3 AC092451.2-201ENST00000538746 658 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 ZNF321P-202ENST00000550843 495 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 AC109446.1-201ENST00000566172 220 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 AC091489.2-201ENST00000566263 604 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 MIR4498-201ENST00000577599 66 ntBASIC0.28□□□□□ -2.36
AP1S3Q96PC3 AC108747.1-201ENST00000609508 535 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 476.8 ms