Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 AL590002.1-201ENST00000406554 418 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.53□□□□□ -2
SKA1Q96BD8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.53□□□□□ -2
SKA1Q96BD8 ERLEC1P1-201ENST00000433806 578 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.53□□□□□ -2
SKA1Q96BD8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.53□□□□□ -2
SKA1Q96BD8 U8.21-201ENST00000459536 136 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.53□□□□□ -2
SKA1Q96BD8 PTP4A1P4-201ENST00000512479 322 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 SNORA31.16-201ENST00000516773 139 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 Y_RNA.704-201ENST00000516851 102 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 AC243972.3-201ENST00000539655 198 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 PRELID2P1-201ENST00000552837 301 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 MIR5692C1-201ENST00000585309 91 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 AC093783.1-201ENST00000612976 329 ntBASIC2.53□□□□□ -2
SKA1Q96BD8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
SKA1Q96BD8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SKA1Q96BD8 RNU6-743P-201ENST00000364151 106 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 RNU6-214P-201ENST00000384130 107 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 RNU6-780P-201ENST00000391030 104 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 SNORA26.3-201ENST00000391119 136 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 RNU6-1068P-201ENST00000410958 103 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.52□□□□□ -2.01
SKA1Q96BD8 USP9YP20-201ENST00000419224 558 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA1Q96BD8 AL359672.1-201ENST00000442302 409 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 GPM6BP3-201ENST00000442797 145 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 AC008628.2-201ENST00000502605 298 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA1Q96BD8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.52□□□□□ -2.01
SKA1Q96BD8 AP005597.4-201ENST00000526762 229 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 AC121758.2-201ENST00000553271 193 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 AL157687.1-201ENST00000554853 619 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA1Q96BD8 AC021231.3-201ENST00000558497 370 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 MIR5694-201ENST00000581190 76 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.52□□□□□ -2.01
SKA1Q96BD8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.52□□□□□ -2.01
SKA1Q96BD8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SKA1Q96BD8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SKA1Q96BD8 SNORD115-3-201ENST00000363100 82 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 SNORA16B-201ENST00000364674 135 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 SNORD14D-201ENST00000384390 87 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 SNORA46.1-201ENST00000391069 153 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 MTCYBP2-201ENST00000407745 171 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 RNU4-53P-201ENST00000410828 140 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SKA1Q96BD8 AC114801.2-201ENST00000503825 781 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 ANXA2P1-201ENST00000505539 926 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.51□□□□□ -2.01
SKA1Q96BD8 RNU6-612P-201ENST00000516909 102 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 AC078814.3-201ENST00000553036 491 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.51□□□□□ -2.01
SKA1Q96BD8 AC012557.2-201ENST00000605919 418 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 RNU6-89P-201ENST00000606519 100 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 ZNF658B-202ENST00000615961 3375 ntBASIC2.51□□□□□ -2.01
SKA1Q96BD8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SKA1Q96BD8 MTND4P23-201ENST00000447723 1363 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC008555.8-201ENST00000623602 2168 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SKA1Q96BD8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SKA1Q96BD8 SNORD32B-201ENST00000364460 84 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 RNU6-1329P-201ENST00000365664 107 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 MIR181A1-201ENST00000385026 110 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 AL357139.1-201ENST00000407792 426 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 RNU4-26P-201ENST00000410270 107 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 USP9YP27-201ENST00000418455 438 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 AL356320.1-201ENST00000429616 163 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC104564.1-201ENST00000493028 407 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC107222.1-201ENST00000510899 637 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 HSPE1P18-201ENST00000517602 280 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC104576.1-201ENST00000524225 88 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA1Q96BD8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.5□□□□□ -2.01
SKA1Q96BD8 FER-210ENST00000628534 558 ntTSL 5 BASIC2.5□□□□□ -2.01
SKA1Q96BD8 MIR1248-201ENST00000629190 106 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.5□□□□□ -2.01
SKA1Q96BD8 MIR1321-201ENST00000637766 79 ntBASIC2.5□□□□□ -2.01
SKA1Q96BD8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SKA1Q96BD8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SKA1Q96BD8 AC009541.1-201ENST00000438279 2662 ntBASIC2.49□□□□□ -2.01
SKA1Q96BD8 Y_RNA.41-201ENST00000362646 102 ntBASIC2.49□□□□□ -2.01
SKA1Q96BD8 RNU6-227P-201ENST00000362865 103 ntBASIC2.49□□□□□ -2.01
SKA1Q96BD8 Y_RNA.318-201ENST00000365131 97 ntBASIC2.49□□□□□ -2.01
SKA1Q96BD8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.49□□□□□ -2.01
SKA1Q96BD8 MRPS10P2-201ENST00000431226 381 ntBASIC2.49□□□□□ -2.01
SKA1Q96BD8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.49□□□□□ -2.01
SKA1Q96BD8 AC008549.1-201ENST00000512900 643 ntBASIC2.49□□□□□ -2.01
SKA1Q96BD8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.49□□□□□ -2.01
SKA1Q96BD8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.49□□□□□ -2.01
SKA1Q96BD8 AC010525.2-201ENST00000590920 195 ntBASIC2.49□□□□□ -2.01
SKA1Q96BD8 AC078795.3-201ENST00000602913 472 ntBASIC2.49□□□□□ -2.01
SKA1Q96BD8 AC064836.2-201ENST00000609491 462 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms