Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF1Q92994 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.84□□□□□ -1.79
BRF1Q92994 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.84□□□□□ -1.79
BRF1Q92994 HMGB1P35-201ENST00000503360 598 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 AC006445.2-201ENST00000510061 472 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 RNU6-1114P-201ENST00000516022 107 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 RN7SKP272-201ENST00000516988 232 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 SNORA31.23-201ENST00000517219 133 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 CKS1BP7-201ENST00000522230 235 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.84□□□□□ -1.79
BRF1Q92994 AC092628.2-201ENST00000622492 339 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 U6.105-201ENST00000637379 88 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
BRF1Q92994 AF117829.1-206ENST00000621883 3802 ntBASIC3.84□□□□□ -1.8
BRF1Q92994 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRF1Q92994 AP001148.1-201ENST00000624124 2359 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRF1Q92994 Z83843.1-201ENST00000604070 3685 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 SNORD56.3-201ENST00000363507 71 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 RNU6-1141P-201ENST00000364520 107 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 RNU6-200P-201ENST00000364743 107 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 RNU6-1280P-201ENST00000365211 107 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 Y_RNA.352-201ENST00000365439 102 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 SNORD63-201ENST00000384262 68 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 Y_RNA.539-201ENST00000384635 107 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.83□□□□□ -1.8
BRF1Q92994 RN7SKP61-201ENST00000410642 295 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.83□□□□□ -1.8
BRF1Q92994 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
BRF1Q92994 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BRF1Q92994 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.83□□□□□ -1.8
BRF1Q92994 RPL32P34-201ENST00000486380 400 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 SNORA64.4-201ENST00000516632 81 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 AL391261.3-201ENST00000557194 520 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 AC021739.1-201ENST00000559631 174 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 AC009163.5-201ENST00000575421 637 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 MIR6076-201ENST00000617521 113 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
BRF1Q92994 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.83□□□□□ -1.8
BRF1Q92994 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BRF1Q92994 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BRF1Q92994 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
BRF1Q92994 SNORA71.3-201ENST00000362582 128 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 RNU6-318P-201ENST00000384283 103 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 RNU6-843P-201ENST00000384454 104 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 AC115115.1-201ENST00000449927 248 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 SSXP4-201ENST00000451349 245 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 AP000870.1-201ENST00000472927 406 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 MED28P2-201ENST00000475771 317 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 RPS29P20-201ENST00000489592 171 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 AC016632.1-201ENST00000503994 196 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 HMGB3P17-201ENST00000504195 649 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 RNU6-1338P-201ENST00000516328 91 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 Y_RNA.700-201ENST00000516806 100 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.82□□□□□ -1.8
BRF1Q92994 MIR3529-201ENST00000637713 78 ntBASIC3.82□□□□□ -1.8
BRF1Q92994 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRF1Q92994 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRF1Q92994 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BRF1Q92994 RNY1-201ENST00000364228 113 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 RNU1-140P-201ENST00000365040 165 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 RNU6-487P-201ENST00000365430 104 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 U8.10-201ENST00000384260 133 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 Y_RNA.785-201ENST00000384290 109 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 AC078809.1-201ENST00000427601 140 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 RPS15AP7-201ENST00000439294 405 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.81□□□□□ -1.8
BRF1Q92994 AC096638.1-201ENST00000444678 216 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 RN7SL330P-201ENST00000469709 307 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.81□□□□□ -1.8
BRF1Q92994 RNU5B-3P-201ENST00000516601 115 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 RNA5SP309-201ENST00000516670 106 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.81□□□□□ -1.8
BRF1Q92994 DEFB108E-201ENST00000524692 240 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 AC022080.3-201ENST00000544433 482 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 AC027288.2-201ENST00000553028 243 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 AC023824.2-201ENST00000566185 400 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 MIR4429-201ENST00000580105 73 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 MIR4444-1-201ENST00000581696 74 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 MIR4444-2-201ENST00000584390 74 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 AC009779.6-201ENST00000603972 165 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 HSPE1P7-201ENST00000604681 321 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.81□□□□□ -1.8
BRF1Q92994 AC073308.1-201ENST00000623696 305 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 AC073476.4-201ENST00000628409 72 ntBASIC3.81□□□□□ -1.8
BRF1Q92994 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRF1Q92994 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
BRF1Q92994 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
BRF1Q92994 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
BRF1Q92994 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRF1Q92994 AC093908.1-201ENST00000623125 8092 ntBASIC3.8□□□□□ -1.8
BRF1Q92994 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
BRF1Q92994 RNU6-338P-201ENST00000383888 105 ntBASIC3.8□□□□□ -1.8
BRF1Q92994 RNU6-209P-201ENST00000384118 107 ntBASIC3.8□□□□□ -1.8
BRF1Q92994 MIR544A-201ENST00000384855 91 ntBASIC3.8□□□□□ -1.8
BRF1Q92994 AL603908.1-201ENST00000406098 201 ntBASIC3.8□□□□□ -1.8
BRF1Q92994 RNA5SP390-201ENST00000410191 113 ntBASIC3.8□□□□□ -1.8
BRF1Q92994 AC245291.1-201ENST00000419501 328 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms