Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RPL27AP8-201ENST00000424277 446 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 AC079780.1-201ENST00000428259 207 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 SSXP4-201ENST00000451349 245 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 RPS4XP22-201ENST00000480755 780 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 AC097462.2-201ENST00000504623 481 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 AL442163.3-201ENST00000554110 156 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 H3F3AP1-201ENST00000559984 334 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 BDH2P1-201ENST00000602288 736 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 Z83818.1-201ENST00000603584 150 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 AC034102.8-201ENST00000615146 484 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 MIR6130-201ENST00000619419 109 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 AC073325.2-201ENST00000339545 159 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 MIR135A2-201ENST00000384854 100 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-882P-201ENST00000391025 103 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-817P-201ENST00000391083 104 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 AL353621.1-201ENST00000418219 243 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 AC117440.1-201ENST00000474107 571 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 RPL30P10-201ENST00000488148 337 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 RNU1-86P-201ENST00000516108 154 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-496P-201ENST00000516145 99 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 RNU1-107P-201ENST00000516617 154 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-914P-201ENST00000516749 109 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 RN7SKP258-201ENST00000517151 304 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 AC093023.1-201ENST00000547375 507 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 MIR5047-201ENST00000579212 100 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 MIR5692A1-201ENST00000580523 69 ntBASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SH3RF3Q8TEJ3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AC010733.2-201ENST00000589496 5702 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 SNORD50.1-201ENST00000362987 71 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.383-201ENST00000383855 97 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-700P-201ENST00000391043 107 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RPL21P75-201ENST00000396599 483 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RPL21P28-201ENST00000401418 483 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RNU2-51P-201ENST00000410708 197 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 YPEL5P1-201ENST00000419731 367 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RPS15AP6-201ENST00000420703 385 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AL590556.1-201ENST00000423231 483 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AC107083.1-201ENST00000439643 279 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RPL21P39-201ENST00000463605 483 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AC091021.1-201ENST00000468051 388 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AC132942.1-201ENST00000486753 483 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AC093591.1-201ENST00000491435 481 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RPL21P16-201ENST00000495531 483 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 SNORD116-28-201ENST00000516123 91 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-390P-201ENST00000516259 103 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 RN7SKP272-201ENST00000516988 232 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 MIR3144-201ENST00000579460 79 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 MIR3124-201ENST00000582636 67 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AC072026.1-201ENST00000605023 201 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AP002826.1-201ENST00000608835 315 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AC073476.4-201ENST00000628409 72 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 AC243829.7-201ENST00000633081 225 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 U6.106-201ENST00000636360 105 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 MTND5P9-201ENST00000503854 1755 ntBASIC3.63□□□□□ -1.83
SH3RF3Q8TEJ3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-858P-201ENST00000362436 107 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 RNU2-43P-201ENST00000410306 190 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AL139132.1-201ENST00000431587 344 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AC090774.1-201ENST00000435925 246 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AC079354.2-201ENST00000453523 154 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 HSPE1P25-201ENST00000455484 251 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AC133134.1-201ENST00000466800 359 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 COX6CP14-201ENST00000469580 174 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 MRPL42P6-201ENST00000486397 371 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 SEPT14P8-201ENST00000508026 178 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AC025755.1-201ENST00000521306 278 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AC104027.1-201ENST00000521887 300 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 MED28P6-201ENST00000558776 231 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AP001485.1-201ENST00000604799 199 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms