Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
EFCAB3Q8N7B9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 RNA5SP335-201ENST00000363817 110 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 SNORA63D-201ENST00000364359 132 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-1235P-201ENST00000384559 107 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 AC104333.2-201ENST00000422630 192 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-893P-201ENST00000458841 100 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 RNU6-498P-201ENST00000459468 107 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 RPS29P22-201ENST00000472363 168 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 RN7SL814P-201ENST00000487715 300 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 AC097462.1-201ENST00000514125 324 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 AP001781.1-201ENST00000530977 207 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 AL110118.1-201ENST00000553543 400 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 uc_338.14-201ENST00000613162 166 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 AC109583.2-201ENST00000617367 129 ntBASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
EFCAB3Q8N7B9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
EFCAB3Q8N7B9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 Y_RNA.17-201ENST00000362433 111 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 Y_RNA.265-201ENST00000364677 108 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 SNORA56-201ENST00000383966 129 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 Y_RNA.466-201ENST00000384294 113 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 MIR105-1-201ENST00000385222 81 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 RNA5SP487-201ENST00000410186 122 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 Y_RNA.593-201ENST00000410292 98 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 RNU7-23P-201ENST00000459465 62 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 RPL21P129-201ENST00000491732 478 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 RNU6-513P-201ENST00000516104 104 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 RNU7-172P-201ENST00000517125 64 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 AP001880.2-201ENST00000538233 448 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 AC006116.3-201ENST00000592968 361 ntBASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.08□□□□□ -1.6
EFCAB3Q8N7B9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 Y_RNA.242-201ENST00000364473 110 ntBASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 SNORD31B-201ENST00000364977 69 ntBASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 GNG5P5-201ENST00000420444 220 ntBASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 AL732292.1-201ENST00000426692 226 ntBASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 NDUFA4P2-201ENST00000489989 244 ntBASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 AC109329.2-201ENST00000519658 482 ntBASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 AC126177.5-201ENST00000549599 178 ntBASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 AC006349.1-201ENST00000555526 235 ntBASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.07□□□□□ -1.6
EFCAB3Q8N7B9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 AL672296.1-201ENST00000427780 2158 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 AC010300.1-201ENST00000600671 5134 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 RNU6-234P-201ENST00000365229 104 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 MIR1255A-201ENST00000408338 113 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 AP000873.1-201ENST00000463987 400 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 RNU6-693P-201ENST00000516134 107 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 RN7SKP282-201ENST00000516824 299 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 MIR3934-201ENST00000579806 107 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 MIR4480-201ENST00000582492 71 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 MIR3936-201ENST00000584304 110 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 MIR4438-201ENST00000585271 93 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
EFCAB3Q8N7B9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms