Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 RPL23AP14-201ENST00000468281 468 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 AC016632.1-201ENST00000503994 196 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 RNU6-561P-201ENST00000516222 102 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 SNORA31.20-201ENST00000517111 133 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 MIR2116-201ENST00000517221 80 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 RNA5SP291-201ENST00000517222 105 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 CYCSP23-201ENST00000519781 313 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 AC136601.2-201ENST00000604356 474 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 AC108081.1-201ENST00000604358 221 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4DQ86TL0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AC010329.5-201ENST00000623497 2174 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 RNU6-969P-201ENST00000383900 105 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 RNU6-643P-201ENST00000384018 107 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 RNU6-356P-201ENST00000384140 107 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 RNU6-793P-201ENST00000384233 104 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 RNA5SP39-201ENST00000411245 120 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AC096649.2-201ENST00000416186 393 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AL162151.2-201ENST00000448875 158 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AC136628.3-201ENST00000521868 290 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AC053481.4-201ENST00000583164 216 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AC019159.1-201ENST00000605094 187 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AL356157.2-201ENST00000605122 111 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 MIR6868-201ENST00000611215 58 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AL359198.2-201ENST00000611836 194 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AL078604.3-201ENST00000615580 211 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 AC112484.5-201ENST00000624189 228 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.64□□□□□ -1.83
ATG4DQ86TL0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
ATG4DQ86TL0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 RNU6-915P-201ENST00000364943 103 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 MIR15B-201ENST00000385045 98 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 AC074117.2-201ENST00000417130 397 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 MTATP6P7-201ENST00000453315 681 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 SNORD116-26-201ENST00000516006 96 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 MIR3921-201ENST00000577308 85 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 AC006380.1-201ENST00000603598 186 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 MIR6875-201ENST00000617506 72 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.63□□□□□ -1.83
ATG4DQ86TL0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4DQ86TL0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 RNU6-454P-201ENST00000364292 107 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 SNORA25.7-201ENST00000364375 127 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 Y_RNA.287-201ENST00000364853 94 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 MIR616-201ENST00000385293 97 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 PPIAP31-201ENST00000405422 495 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 RNA5SP239-201ENST00000410218 129 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 RNU6-628P-201ENST00000410675 107 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 AC063976.4-201ENST00000421971 163 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 AC083863.1-201ENST00000438811 231 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 RNU6-703P-201ENST00000516946 107 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 RNU2-12P-201ENST00000517216 168 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 RNU4-60P-201ENST00000517239 135 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 TRAV28-201ENST00000557548 323 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 MIR4727-201ENST00000622232 55 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 LINC02471-203ENST00000641941 4752 ntBASIC3.62□□□□□ -1.83
ATG4DQ86TL0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms