Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 AL591473.1-201ENST00000464297 313 ntBASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 RPL21P129-201ENST00000491732 478 ntBASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 AC019159.1-201ENST00000605094 187 ntBASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 uc_338.13-201ENST00000618243 179 ntBASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 DHX9P1-201ENST00000436565 3076 ntBASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 FAM35BP-202ENST00000497389 3337 ntBASIC4.89□□□□□ -1.63
TRAF7Q6Q0C0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 MIR372-201ENST00000362225 67 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 RNU1-72P-201ENST00000362976 153 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 Y_RNA.94-201ENST00000363068 106 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 RNU5F-3P-201ENST00000363767 117 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 Y_RNA.179-201ENST00000363844 90 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 Z98749.2-208ENST00000381646 500 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 MIR518D-201ENST00000385014 87 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 AL512633.1-201ENST00000399931 655 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 SNORA11F-201ENST00000408237 128 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 RPL23AP95-201ENST00000426806 265 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 AC112220.1-201ENST00000434628 355 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 RPL23AP52-201ENST00000439311 478 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 AC084364.2-201ENST00000546924 395 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 AC015912.2-201ENST00000571053 181 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 RN7SL600P-201ENST00000581811 299 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 AC020895.1-201ENST00000595362 272 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 OR51H2P-202ENST00000641424 3046 ntBASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAF7Q6Q0C0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 MIR383-201ENST00000362257 73 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 SNORD56.1-201ENST00000362913 68 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 Y_RNA.341-201ENST00000365341 102 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 RNU1-73P-201ENST00000383971 164 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 Y_RNA.426-201ENST00000384068 113 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 RNU6-217P-201ENST00000384164 104 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 MIR3065-201ENST00000390137 79 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 MIR1271-201ENST00000408537 86 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 AC002075.2-201ENST00000425207 252 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 GPM6BP3-201ENST00000442797 145 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 HMGN2P21-201ENST00000447764 270 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 AL358232.1-201ENST00000448030 501 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 AC016632.1-201ENST00000503994 196 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 PARP4P3-201ENST00000510265 317 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 SCARNA23-201ENST00000516060 130 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 RNU6-162P-201ENST00000516228 103 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 RNU1-104P-201ENST00000517280 175 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 RN7SL435P-201ENST00000584418 282 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 AC006130.2-201ENST00000586202 326 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 AC079587.1-201ENST00000603846 277 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 AL672167.1-204ENST00000641875 3017 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 AC000123.3-201ENST00000624029 4975 ntBASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRAF7Q6Q0C0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 RNU1-94P-201ENST00000362627 173 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 RNU6-219P-201ENST00000364728 107 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 SNORD32A-201ENST00000364805 84 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 RNU1-140P-201ENST00000365040 165 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 MIR891A-201ENST00000401237 79 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 AL031003.1-201ENST00000404229 172 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 RPS20P14-201ENST00000412545 360 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 AC125238.1-201ENST00000448842 249 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 AC012308.1-201ENST00000451232 178 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 SNORA84-201ENST00000459229 133 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 SNRPGP7-201ENST00000469016 106 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 AC078817.1-201ENST00000492623 435 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 RNU7-61P-201ENST00000515897 61 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 SNORA70.12-201ENST00000516084 153 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 CR383656.8-201ENST00000549046 145 ntBASIC4.86□□□□□ -1.63
TRAF7Q6Q0C0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms