Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 U4.7-201ENST00000638126 106 ntBASIC3.74□□□□□ -1.81
CNKSR3Q6P9H4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNKSR3Q6P9H4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CNKSR3Q6P9H4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CNKSR3Q6P9H4 CUL1P1-201ENST00000509510 2425 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 RNU4-9P-201ENST00000364951 139 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.304-201ENST00000365011 112 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 RNU6-741P-201ENST00000383889 107 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.418-201ENST00000384029 102 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 RNU6-17P-201ENST00000384245 107 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 RNU6-18P-201ENST00000384527 107 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AP000567.1-201ENST00000406413 156 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.590-201ENST00000410140 107 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AC004552.1-201ENST00000419089 348 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 TOMM20P4-201ENST00000427861 435 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AC009296.1-201ENST00000443146 155 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 RPS26P3-201ENST00000470205 348 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AC090543.2-201ENST00000483963 348 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AC004057.1-201ENST00000485827 348 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 RPL23AP75-201ENST00000491601 451 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 RPL30P5-201ENST00000494923 336 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AC074133.1-201ENST00000515696 183 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 LARP7P3-201ENST00000579888 337 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 MIR4423-201ENST00000580922 80 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AL645944.1-201ENST00000603857 493 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 AC110741.2-201ENST00000605278 268 ntBASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.73□□□□□ -1.81
CNKSR3Q6P9H4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AC002546.1-201ENST00000588041 2504 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.82-201ENST00000363000 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.92-201ENST00000363043 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.235-201ENST00000364412 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.306-201ENST00000365015 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.312-201ENST00000365089 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.322-201ENST00000365151 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RNU6-1117P-201ENST00000384525 104 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RPS4XP3-201ENST00000398541 413 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AL357075.1-201ENST00000404107 726 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RNU2-51P-201ENST00000410708 197 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RNA5SP39-201ENST00000411245 120 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AC007919.1-201ENST00000429380 217 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RPS29P31-201ENST00000446147 164 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.650-201ENST00000459002 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RNA5SP310-201ENST00000459084 116 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AP001324.2-201ENST00000461163 319 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AC087477.1-201ENST00000465747 340 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 UBE2DNL-203ENST00000474922 222 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RPL23AP94-201ENST00000512518 302 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RNU6-1219P-201ENST00000516143 112 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RNA5SP341-201ENST00000516261 117 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.679-201ENST00000516416 91 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.777-201ENST00000516982 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 SNORA31.18-201ENST00000517043 134 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 SNORA31.19-201ENST00000517079 126 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AL451007.1-201ENST00000595491 289 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 KLKP1-201ENST00000595979 403 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.771-201ENST00000598668 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 RPL23AP88-201ENST00000605759 454 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 Y_RNA.789-201ENST00000622480 102 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 SCARNA4-201ENST00000629045 128 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AC233981.2-201ENST00000611524 1614 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 AC135776.4-201ENST00000624300 1904 ntBASIC3.72□□□□□ -1.81
CNKSR3Q6P9H4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 RNA5SP361-201ENST00000362686 118 ntBASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-879P-201ENST00000364328 108 ntBASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 Y_RNA.446-201ENST00000384178 104 ntBASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 RNU6-735P-201ENST00000410612 107 ntBASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 RNU4-47P-201ENST00000410876 114 ntBASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.71□□□□□ -1.82
CNKSR3Q6P9H4 RPS15AP7-201ENST00000439294 405 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms