Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
RC3H1Q5TC82 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 RNU6-235P-201ENST00000362644 107 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 RNU6-942P-201ENST00000363002 107 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 RNA5SP51-201ENST00000364750 119 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 RNU6-915P-201ENST00000364943 103 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 MIR1251-201ENST00000408552 70 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 RNU6-588P-201ENST00000410281 105 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 RNA5SP475-201ENST00000410568 110 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 RN7SKP53-201ENST00000411337 315 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 AL356867.1-201ENST00000429623 299 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 AL353748.1-201ENST00000440753 474 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 HSPE1P4-201ENST00000550617 308 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 CYCSP39-201ENST00000565821 309 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 AC006380.1-201ENST00000603598 186 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 AC108081.1-201ENST00000604358 221 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.93□□□□□ -1.62
RC3H1Q5TC82 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RC3H1Q5TC82 MARK2P15-201ENST00000432204 2186 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 AC010329.5-201ENST00000623497 2174 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 RNY1P11-201ENST00000363759 113 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 Y_RNA.287-201ENST00000364853 94 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 SNORA36A-201ENST00000384221 132 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 MIR15B-201ENST00000385045 98 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 SNORA40.5-201ENST00000391061 128 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 U3.40-201ENST00000408706 208 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 MTCO1P44-201ENST00000441935 243 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 snoU13.6-201ENST00000458785 104 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 KC877373.1-201ENST00000479066 408 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 AC016632.1-201ENST00000503994 196 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 AC244505.7-201ENST00000599675 272 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 AL391903.3-201ENST00000612158 163 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RC3H1Q5TC82 ZNF962P-201ENST00000443465 3140 ntBASIC4.92□□□□□ -1.62
RC3H1Q5TC82 AC139713.2-215ENST00000641428 5037 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 RNA5SP502-201ENST00000362694 119 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 RNU6-324P-201ENST00000363957 106 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 RNU1-140P-201ENST00000365040 165 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 RNU6-793P-201ENST00000384233 104 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 SNORA11.2-201ENST00000408318 127 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 RN7SKP284-201ENST00000411002 343 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AL160275.2-201ENST00000412010 394 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 ATP5A1P2-201ENST00000412323 255 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AC096649.2-201ENST00000416186 393 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AIMP1P2-201ENST00000425294 312 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AL135790.2-201ENST00000437701 267 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 HSPE1P13-201ENST00000451143 297 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AC245047.8-201ENST00000456455 284 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 SNRPGP7-201ENST00000469016 106 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 MIR3921-201ENST00000577308 85 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 MIR3121-201ENST00000579680 77 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 AC011471.1-201ENST00000585766 187 ntBASIC4.91□□□□□ -1.62
RC3H1Q5TC82 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RC3H1Q5TC82 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RC3H1Q5TC82 RNU6-1285P-201ENST00000363480 105 ntBASIC4.9□□□□□ -1.63
RC3H1Q5TC82 MIR124-3-201ENST00000384866 87 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms