Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX4Q33E94 AC012507.3-201ENST00000603556 477 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AC091805.2-201ENST00000603848 235 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AC017083.3-201ENST00000609955 700 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AC013412.1-201ENST00000610687 192 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 HULC.1-201ENST00000612720 240 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AC007792.1-201ENST00000623023 402 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
RFX4Q33E94 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.62□□□□□ -2.15
RFX4Q33E94 Y_RNA.255-201ENST00000364581 97 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AL356432.1-201ENST00000405809 419 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 RNU6-293P-201ENST00000411259 106 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.62□□□□□ -2.15
RFX4Q33E94 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 IFNA20P-201ENST00000436840 528 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.62□□□□□ -2.15
RFX4Q33E94 AC093534.1-201ENST00000504977 132 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX4Q33E94 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RFX4Q33E94 RNU5F-2P-201ENST00000516066 82 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 RNU6-667P-201ENST00000517186 102 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX4Q33E94 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX4Q33E94 COPS8P3-201ENST00000526024 482 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AP000763.2-201ENST00000540641 163 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 NDUFA5P6-201ENST00000542110 379 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.62□□□□□ -2.15
RFX4Q33E94 AC103996.1-201ENST00000555468 102 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AL118558.2-201ENST00000556294 238 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX4Q33E94 AL031274.2-201ENST00000599419 203 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AP001330.5-201ENST00000607176 411 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AL132822.1-201ENST00000617063 513 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 uc_338.34-201ENST00000617467 174 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 AC139792.3-201ENST00000623525 224 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.62□□□□□ -2.15
RFX4Q33E94 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.62□□□□□ -2.15
RFX4Q33E94 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
RFX4Q33E94 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RFX4Q33E94 RNU6-827P-201ENST00000365553 106 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 RNU6-1222P-201ENST00000384615 107 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AL079342.1-201ENST00000401460 267 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 RNU2-32P-201ENST00000411193 191 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.61□□□□□ -2.15
RFX4Q33E94 RPS15AP10-201ENST00000432472 382 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.61□□□□□ -2.15
RFX4Q33E94 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.61□□□□□ -2.15
RFX4Q33E94 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.61□□□□□ -2.15
RFX4Q33E94 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.61□□□□□ -2.15
RFX4Q33E94 AL031274.1-201ENST00000450334 232 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.61□□□□□ -2.15
RFX4Q33E94 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.61□□□□□ -2.15
RFX4Q33E94 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.61□□□□□ -2.15
RFX4Q33E94 RPS29P21-201ENST00000496272 170 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 HMGB1P35-201ENST00000503360 598 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.61□□□□□ -2.15
RFX4Q33E94 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.61□□□□□ -2.15
RFX4Q33E94 RN7SKP256-201ENST00000517201 314 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC109479.2-201ENST00000517842 174 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC104383.1-201ENST00000530297 370 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.61□□□□□ -2.15
RFX4Q33E94 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.61□□□□□ -2.15
RFX4Q33E94 DEFB122-202ENST00000569013 197 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC104581.2-201ENST00000572227 430 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.61□□□□□ -2.15
RFX4Q33E94 NBR2-204ENST00000587322 63 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC004223.2-201ENST00000590309 544 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AL078605.1-201ENST00000603529 500 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC004908.3-201ENST00000610248 625 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC087241.4-201ENST00000612441 480 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC063943.3-201ENST00000615562 356 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 AC241585.2-209ENST00000638217 143 ntBASIC1.61□□□□□ -2.15
RFX4Q33E94 MTND4P14-201ENST00000435799 1354 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RFX4Q33E94 SNORD32A-201ENST00000364805 84 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 RNU4-20P-201ENST00000365601 151 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 RNU6-259P-201ENST00000383999 107 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 RNU6-43P-201ENST00000384302 107 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 RPS29P13-201ENST00000402041 169 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 AC244636.1-201ENST00000421152 228 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 USP9YP18-201ENST00000425912 695 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.6□□□□□ -2.15
RFX4Q33E94 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX4Q33E94 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX4Q33E94 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.6□□□□□ -2.15
RFX4Q33E94 AC009646.1-201ENST00000510455 318 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 RNA5SP182-201ENST00000516064 82 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 RNU6-1038P-201ENST00000516516 104 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 RNU6-965P-201ENST00000516721 96 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.6□□□□□ -2.15
RFX4Q33E94 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX4Q33E94 BNIP3P16-201ENST00000589779 534 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.6□□□□□ -2.15
RFX4Q33E94 AC107304.1-201ENST00000604229 296 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 U2.17-201ENST00000611454 95 ntBASIC1.6□□□□□ -2.15
RFX4Q33E94 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
RFX4Q33E94 MIR6863-201ENST00000636112 90 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms