Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
IRF9Q00978 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
IRF9Q00978 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.38□□□□□ -1.87
IRF9Q00978 SNORD114-19-201ENST00000363072 75 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 Y_RNA.307-201ENST00000365022 117 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
IRF9Q00978 RNU6-318P-201ENST00000384283 103 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 RNU6-159P-201ENST00000391080 106 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AC126124.2-201ENST00000413542 321 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AC108059.2-201ENST00000434626 151 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.38□□□□□ -1.87
IRF9Q00978 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.38□□□□□ -1.87
IRF9Q00978 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AP001324.2-201ENST00000461163 319 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 RPL7P47-201ENST00000497299 556 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AIG1P1-201ENST00000503376 148 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 RNU5F-2P-201ENST00000516066 82 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AC023157.2-201ENST00000540596 141 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 UBL5P4-201ENST00000562584 236 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 MIR5695-201ENST00000579717 85 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 MIR4659A-201ENST00000580269 81 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AC090425.1-201ENST00000610007 140 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.38□□□□□ -1.87
IRF9Q00978 AC240442.1-201ENST00000616055 283 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AC005296.1-201ENST00000616145 209 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 AC039056.2-201ENST00000622261 511 ntBASIC3.38□□□□□ -1.87
IRF9Q00978 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.38□□□□□ -1.87
IRF9Q00978 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.38□□□□□ -1.87
IRF9Q00978 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
IRF9Q00978 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
IRF9Q00978 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.37□□□□□ -1.87
IRF9Q00978 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
IRF9Q00978 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
IRF9Q00978 Y_RNA.40-201ENST00000362645 93 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 RNA5SP361-201ENST00000362686 118 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 RNA5SP124-201ENST00000362739 110 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 RNU4-56P-201ENST00000364700 142 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 MIR200C-201ENST00000384980 68 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 RPL21P38-201ENST00000418090 167 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 WARS2P1-201ENST00000429678 537 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.37□□□□□ -1.87
IRF9Q00978 AL133547.1-201ENST00000448546 220 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 HMGN1P18-201ENST00000457642 277 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 snoU13.14-201ENST00000459372 104 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.37□□□□□ -1.87
IRF9Q00978 HMGB1P35-201ENST00000503360 598 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 RNU6-570P-201ENST00000517051 105 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.37□□□□□ -1.87
IRF9Q00978 CYP4A27P-201ENST00000567218 190 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 AL121772.2-201ENST00000614331 297 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.37□□□□□ -1.87
IRF9Q00978 MIR376A1-201ENST00000616574 68 ntBASIC3.37□□□□□ -1.87
IRF9Q00978 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
IRF9Q00978 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.37□□□□□ -1.87
IRF9Q00978 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
IRF9Q00978 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
IRF9Q00978 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
IRF9Q00978 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
IRF9Q00978 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
IRF9Q00978 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
IRF9Q00978 RNU6-529P-201ENST00000363383 104 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 AL079342.1-201ENST00000401460 267 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 MRPL35P1-201ENST00000404272 572 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 AL445305.1-201ENST00000432577 575 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.36□□□□□ -1.87
IRF9Q00978 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 AC025518.1-201ENST00000479856 347 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 AC104619.4-201ENST00000510773 249 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 SNORD59.2-201ENST00000516873 68 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 RNA5SP54-201ENST00000516951 92 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 AC136932.1-201ENST00000574771 208 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 AL034555.1-201ENST00000604816 211 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 uc_338.14-201ENST00000613162 166 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 AC011476.5-201ENST00000615594 130 ntBASIC3.36□□□□□ -1.87
IRF9Q00978 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
IRF9Q00978 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
IRF9Q00978 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
IRF9Q00978 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
IRF9Q00978 Y_RNA.143-201ENST00000363520 106 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RNU6-1318P-201ENST00000365389 103 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RNU6-926P-201ENST00000384075 107 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RNU6-281P-201ENST00000384212 103 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RNA5SP171-201ENST00000391071 115 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RNU6-1001P-201ENST00000411265 100 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 AC093578.1-201ENST00000415219 368 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 AC017083.1-201ENST00000428093 483 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 HMGN2P31-201ENST00000432430 273 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 SNORD127-201ENST00000458892 86 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RNU6-1132P-201ENST00000459214 107 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 TRBVB-201ENST00000477100 408 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RPS27P26-201ENST00000494583 239 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RN7SKP18-201ENST00000516005 275 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 RN7SKP49-201ENST00000516675 260 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.35□□□□□ -1.87
IRF9Q00978 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms