Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AL606534.2-204ENST00000635008 178 ntBASIC3.25□□□□□ -1.89
CDC42EP1Q00587 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42EP1Q00587 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42EP1Q00587 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.25□□□□□ -1.89
CDC42EP1Q00587 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42EP1Q00587 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.80-201ENST00000362996 102 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RNU6-1141P-201ENST00000364520 107 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RNU6-1286P-201ENST00000383871 107 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RNU6-142P-201ENST00000384019 107 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.485-201ENST00000384395 102 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.510-201ENST00000384511 114 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RNU6-1222P-201ENST00000384615 107 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RNU1-101P-201ENST00000391171 127 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RNU6-1140P-201ENST00000410517 106 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.605-201ENST00000410577 105 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP1Q00587 AC096644.2-201ENST00000429278 159 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 AL353752.1-201ENST00000454946 260 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RNU7-169P-201ENST00000459456 61 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 AC015911.1-201ENST00000495111 156 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 RNU5B-3P-201ENST00000516601 115 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 HSBP1P1-201ENST00000555205 166 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 MIR5047-201ENST00000579212 100 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 AL391813.1-201ENST00000603098 260 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 AL162373.1-201ENST00000620433 407 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 AC007318.2-201ENST00000620999 243 ntBASIC3.24□□□□□ -1.89
CDC42EP1Q00587 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP1Q00587 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP1Q00587 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP1Q00587 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP1Q00587 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 RNU4-42P-201ENST00000364738 142 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 RNU4-9P-201ENST00000364951 139 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 RNU6-805P-201ENST00000365643 106 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.527-201ENST00000384573 102 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 SNORA12.2-201ENST00000391040 156 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 MTCYBP2-201ENST00000407745 171 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AC138623.1-201ENST00000418060 216 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AL358453.1-201ENST00000422522 250 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 GPM6BP3-201ENST00000442797 145 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AC016632.1-201ENST00000503994 196 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AC021146.2-201ENST00000504736 556 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 RNU7-175P-201ENST00000515915 61 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.720-201ENST00000517166 92 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AC144568.1-201ENST00000520139 137 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AC105137.2-201ENST00000569073 466 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AC136443.5-201ENST00000603741 370 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 SNORD58B-201ENST00000607313 66 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AL138825.1-201ENST00000618587 192 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CDC42EP1Q00587 GABRG2-229ENST00000641017 3628 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 AC009487.2-201ENST00000420969 6821 ntBASIC3.23□□□□□ -1.89
CDC42EP1Q00587 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.405-201ENST00000383979 100 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.451-201ENST00000384200 100 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.524-201ENST00000384564 100 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.561-201ENST00000384694 100 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 RNU6-985P-201ENST00000410182 104 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 Z82188.1-201ENST00000436709 154 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 AC004383.1-201ENST00000438135 289 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 RN7SL633P-201ENST00000488974 297 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 RPS27P26-201ENST00000494583 239 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 Y_RNA.706-201ENST00000516933 99 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.22□□□□□ -1.89
CDC42EP1Q00587 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.22□□□□□ -1.89
CDC42EP1Q00587 AC104581.2-201ENST00000572227 430 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 RPS15AP11-201ENST00000594193 385 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 AC100812.1-201ENST00000607622 580 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 RNU6-91P-201ENST00000607774 107 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 AC092628.2-201ENST00000622492 339 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 AC007792.1-201ENST00000623023 402 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 SNORA43.4-201ENST00000629559 138 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 MIR4272-201ENST00000635924 64 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 AC091812.1-201ENST00000432235 1948 ntBASIC3.22□□□□□ -1.89
CDC42EP1Q00587 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP1Q00587 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP1Q00587 AC002543.1-201ENST00000299783 1954 ntBASIC3.21□□□□□ -1.89
CDC42EP1Q00587 ZNF72P-201ENST00000425869 1908 ntBASIC3.21□□□□□ -1.9
CDC42EP1Q00587 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDC42EP1Q00587 U3.13-201ENST00000364804 214 ntBASIC3.21□□□□□ -1.9
CDC42EP1Q00587 SNORA69.1-201ENST00000390904 137 ntBASIC3.21□□□□□ -1.9
CDC42EP1Q00587 RN7SKP61-201ENST00000410642 295 ntBASIC3.21□□□□□ -1.9
CDC42EP1Q00587 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.21□□□□□ -1.9
CDC42EP1Q00587 AC244670.1-201ENST00000436879 112 ntBASIC3.21□□□□□ -1.9
CDC42EP1Q00587 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.21□□□□□ -1.9
CDC42EP1Q00587 CHEK2P4-201ENST00000450340 246 ntBASIC3.21□□□□□ -1.9
CDC42EP1Q00587 OR2AQ1P-201ENST00000451972 200 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms