Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SNORA62.1-201ENST00000364287 154 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 RNU2-8P-201ENST00000410727 190 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 RPS3AP3-201ENST00000411933 242 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 AC007098.1-201ENST00000420122 367 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 MTATP6P16-201ENST00000434543 526 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.59□□□□□ -2.15
CCNA1P78396 AL022238.1-201ENST00000442557 355 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 AC244505.5-201ENST00000443639 207 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.59□□□□□ -2.15
CCNA1P78396 snoU13.9-201ENST00000458927 103 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 RPL30P12-201ENST00000474666 353 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.59□□□□□ -2.15
CCNA1P78396 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.59□□□□□ -2.15
CCNA1P78396 RNU1-86P-201ENST00000516108 154 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 RNU1-107P-201ENST00000516617 154 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 Vault.3-201ENST00000516676 95 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.59□□□□□ -2.15
CCNA1P78396 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.59□□□□□ -2.15
CCNA1P78396 AC115990.1-201ENST00000526957 301 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.59□□□□□ -2.15
CCNA1P78396 BNIP3P6-201ENST00000549284 499 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.59□□□□□ -2.15
CCNA1P78396 MIR4452-201ENST00000583004 71 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 AC005786.1-201ENST00000588553 154 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 AC078795.2-201ENST00000602835 1252 ntBASIC1.59□□□□□ -2.15
CCNA1P78396 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.59□□□□□ -2.15
CCNA1P78396 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.59□□□□□ -2.16
CCNA1P78396 AL161722.3-201ENST00000605789 2983 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCNA1P78396 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCNA1P78396 HMGN1P14-201ENST00000412459 517 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.58□□□□□ -2.16
CCNA1P78396 CYCSP46-201ENST00000423569 204 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.58□□□□□ -2.16
CCNA1P78396 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.58□□□□□ -2.16
CCNA1P78396 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.58□□□□□ -2.16
CCNA1P78396 AC073614.1-201ENST00000438690 650 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 MTCYBP1-201ENST00000454315 1119 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 AC114801.2-201ENST00000503825 781 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 MTND1P22-201ENST00000510572 951 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.58□□□□□ -2.16
CCNA1P78396 RNA5SP445-201ENST00000515889 115 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 AC060788.1-201ENST00000521318 469 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 MIR3915-201ENST00000578518 97 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 MIR5692A1-201ENST00000580523 69 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 AC090578.1-201ENST00000604955 591 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.58□□□□□ -2.16
CCNA1P78396 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.58□□□□□ -2.16
CCNA1P78396 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CCNA1P78396 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCNA1P78396 RNU6-169P-201ENST00000365336 107 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 Y_RNA.367-201ENST00000365544 101 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 Y_RNA.576-201ENST00000384781 102 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 SNORA40.3-201ENST00000390964 122 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.57□□□□□ -2.16
CCNA1P78396 RPL21P90-201ENST00000415692 466 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 AL365203.2-201ENST00000423444 196 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 RPL39P29-201ENST00000447779 157 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.57□□□□□ -2.16
CCNA1P78396 AC116562.3-201ENST00000506136 177 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.57□□□□□ -2.16
CCNA1P78396 AC090572.1-201ENST00000519251 160 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 AC068587.5-201ENST00000528506 175 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CCNA1P78396 LRRC34P1-201ENST00000542742 915 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 AL603839.4-201ENST00000624658 1005 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 MIR1248-201ENST00000629190 106 ntBASIC1.57□□□□□ -2.16
CCNA1P78396 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCNA1P78396 Y_RNA.169-201ENST00000363745 96 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 RNA5SP493-201ENST00000364115 91 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 RNU6-116P-201ENST00000384042 109 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 MT-TH-201ENST00000387441 69 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 AL591043.1-201ENST00000432461 424 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 MTCO1P44-201ENST00000441935 243 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.56□□□□□ -2.16
CCNA1P78396 RPS29P23-201ENST00000458635 123 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 ATP5EP1-201ENST00000510257 156 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 RNVU1-2-201ENST00000516326 135 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 RNU6-685P-201ENST00000517088 95 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 SNORA4-201ENST00000584302 138 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 AC073539.2-201ENST00000597113 165 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 AC063943.3-201ENST00000615562 356 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 AC091304.6-201ENST00000619761 202 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.56□□□□□ -2.16
CCNA1P78396 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.56□□□□□ -2.16
CCNA1P78396 RNU4-21P-201ENST00000362802 126 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.55□□□□□ -2.16
CCNA1P78396 MIR489-201ENST00000384923 84 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 SNORA26.8-201ENST00000391306 124 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.55□□□□□ -2.16
CCNA1P78396 RPL31P35-201ENST00000431058 377 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms