Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC012507.3-201ENST00000603556 477 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 AC108706.1-201ENST00000611053 297 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 AC092106.3-201ENST00000611308 722 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 AC006386.1-201ENST00000619436 415 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
AP3S2P59780 MTND4P16-201ENST00000466108 1367 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RNA5SP99-201ENST00000364020 114 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 RPS3AP37-201ENST00000419176 745 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 RAB28P5-201ENST00000427490 651 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 RNU7-34P-201ENST00000459394 64 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 AC010587.2-201ENST00000511727 448 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 MTND2P7-201ENST00000521337 640 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.56□□□□□ -2.32
AP3S2P59780 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.56□□□□□ -2.32
AP3S2P59780 ZNF321P-202ENST00000550843 495 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 AC015712.3-201ENST00000559380 164 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 MTND4LP25-201ENST00000570218 163 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.56□□□□□ -2.32
AP3S2P59780 AC068790.6-201ENST00000602558 258 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
AP3S2P59780 AL121895.2-201ENST00000619558 447 ntBASIC0.56□□□□□ -2.32
AP3S2P59780 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
AP3S2P59780 RNU6-433P-201ENST00000363216 104 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 RNU5E-7P-201ENST00000365290 117 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 RNU6-298P-201ENST00000390888 96 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 SNORA11.2-201ENST00000408318 127 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 RPS26P5-201ENST00000418544 335 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.55□□□□□ -2.32
AP3S2P59780 AC002429.1-201ENST00000437672 148 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.55□□□□□ -2.32
AP3S2P59780 AL360271.2-201ENST00000447710 161 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 AC007395.1-201ENST00000451333 677 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 AC010531.2-201ENST00000465012 153 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 COX6CP14-201ENST00000469580 174 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.55□□□□□ -2.32
AP3S2P59780 AC117454.1-201ENST00000491120 168 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 RNU2-10P-201ENST00000516375 211 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 RN7SKP49-201ENST00000516675 260 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 SNORA31.16-201ENST00000516773 139 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 SUMO2P16-201ENST00000519475 264 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 AL121579.1-201ENST00000555129 305 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 HMGN1P30-201ENST00000589286 268 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 AC022432.1-201ENST00000595739 310 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.55□□□□□ -2.32
AP3S2P59780 AC084824.5-201ENST00000612009 413 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 AL445523.1-201ENST00000451184 1362 ntBASIC0.55□□□□□ -2.32
AP3S2P59780 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
AP3S2P59780 Y_RNA.124-201ENST00000363339 93 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 SNORD31B-201ENST00000364977 69 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
AP3S2P59780 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 FGF7P8-201ENST00000402994 292 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AC019070.1-201ENST00000415008 1024 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 C1DP2-201ENST00000418167 426 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.54□□□□□ -2.32
AP3S2P59780 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
AP3S2P59780 AC004941.2-201ENST00000427009 228 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.54□□□□□ -2.32
AP3S2P59780 AC016925.1-201ENST00000458303 298 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 RNU7-14P-201ENST00000459331 62 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.54□□□□□ -2.32
AP3S2P59780 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.54□□□□□ -2.32
AP3S2P59780 SNORA19.3-201ENST00000516165 130 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 RNU6-1098P-201ENST00000516772 96 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AC107934.1-201ENST00000522215 217 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 ADI1P3-201ENST00000549509 470 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AC087883.1-201ENST00000551882 391 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.54□□□□□ -2.32
AP3S2P59780 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.54□□□□□ -2.32
AP3S2P59780 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.54□□□□□ -2.32
AP3S2P59780 BNIP3P16-201ENST00000589779 534 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AL590095.2-201ENST00000604136 117 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AC080078.3-201ENST00000605407 463 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AC012409.4-201ENST00000612923 249 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AC126177.8-201ENST00000618339 1015 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 AC023934.1-201ENST00000574529 2389 ntBASIC0.54□□□□□ -2.32
AP3S2P59780 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
AP3S2P59780 SNORD116.1-201ENST00000365628 92 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 Y_RNA.465-201ENST00000384293 102 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 MTCYBP2-201ENST00000407745 171 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.53□□□□□ -2.32
AP3S2P59780 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.53□□□□□ -2.32
AP3S2P59780 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.53□□□□□ -2.32
AP3S2P59780 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.53□□□□□ -2.32
AP3S2P59780 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.53□□□□□ -2.32
AP3S2P59780 AL163973.1-201ENST00000484753 577 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 AL163540.1-201ENST00000485382 386 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 AC104806.1-201ENST00000508720 308 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 AC108078.2-201ENST00000510750 236 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.53□□□□□ -2.32
AP3S2P59780 AL590705.4-201ENST00000532209 134 ntBASIC0.53□□□□□ -2.32
AP3S2P59780 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
AP3S2P59780 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.53□□□□□ -2.32
AP3S2P59780 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.53□□□□□ -2.32
AP3S2P59780 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms