Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.59□□□□□ -1.83
LTBRP36941 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBRP36941 AP002884.2-201ENST00000471647 395 ntBASIC3.59□□□□□ -1.83
LTBRP36941 RNU6-58P-201ENST00000517143 103 ntBASIC3.59□□□□□ -1.83
LTBRP36941 AC091152.3-201ENST00000604227 325 ntBASIC3.59□□□□□ -1.83
LTBRP36941 AC073657.2-201ENST00000605661 303 ntBASIC3.59□□□□□ -1.83
LTBRP36941 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.59□□□□□ -1.83
LTBRP36941 MIR7106-201ENST00000612419 65 ntBASIC3.59□□□□□ -1.83
LTBRP36941 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LTBRP36941 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
LTBRP36941 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LTBRP36941 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LTBRP36941 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBRP36941 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
LTBRP36941 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBRP36941 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBRP36941 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.58□□□□□ -1.84
LTBRP36941 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LTBRP36941 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LTBRP36941 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LTBRP36941 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBRP36941 SNORD81.1-201ENST00000363064 77 ntBASIC3.58□□□□□ -1.84
LTBRP36941 SNORA5B-201ENST00000363786 132 ntBASIC3.58□□□□□ -1.84
LTBRP36941 SNORD27-201ENST00000363981 72 ntBASIC3.58□□□□□ -1.84
LTBRP36941 Y_RNA.416-201ENST00000384014 113 ntBASIC3.58□□□□□ -1.84
LTBRP36941 MIR93-201ENST00000385024 80 ntBASIC3.58□□□□□ -1.84
LTBRP36941 SNORA26.3-201ENST00000391119 136 ntBASIC3.58□□□□□ -1.84
LTBRP36941 AL133475.1-201ENST00000404414 305 ntBASIC3.58□□□□□ -1.84
LTBRP36941 SNORD12B-201ENST00000410433 91 ntBASIC3.58□□□□□ -1.84
LTBRP36941 RNU6-1140P-201ENST00000410517 106 ntBASIC3.58□□□□□ -1.84
LTBRP36941 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.58□□□□□ -1.84
LTBRP36941 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBRP36941 AL590135.1-201ENST00000422215 156 ntBASIC3.58□□□□□ -1.84
LTBRP36941 AC019205.3-201ENST00000424573 156 ntBASIC3.58□□□□□ -1.84
LTBRP36941 AC107083.1-201ENST00000439643 279 ntBASIC3.58□□□□□ -1.84
LTBRP36941 HMGB3P17-201ENST00000504195 649 ntBASIC3.58□□□□□ -1.84
LTBRP36941 RNA5SP154-201ENST00000516193 111 ntBASIC3.58□□□□□ -1.84
LTBRP36941 RNU6-1198P-201ENST00000516904 67 ntBASIC3.58□□□□□ -1.84
LTBRP36941 SNORD19.2-201ENST00000516978 73 ntBASIC3.58□□□□□ -1.84
LTBRP36941 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBRP36941 MIR4727-201ENST00000622232 55 ntBASIC3.58□□□□□ -1.84
LTBRP36941 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBRP36941 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBRP36941 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBRP36941 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.58□□□□□ -1.84
LTBRP36941 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LTBRP36941 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.57□□□□□ -1.84
LTBRP36941 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
LTBRP36941 AC002543.1-201ENST00000299783 1954 ntBASIC3.57□□□□□ -1.84
LTBRP36941 MIR335-201ENST00000362173 94 ntBASIC3.57□□□□□ -1.84
LTBRP36941 SNORD113-8-201ENST00000363497 74 ntBASIC3.57□□□□□ -1.84
LTBRP36941 RNU6-137P-201ENST00000363680 108 ntBASIC3.57□□□□□ -1.84
LTBRP36941 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LTBRP36941 RNU6-281P-201ENST00000384212 103 ntBASIC3.57□□□□□ -1.84
LTBRP36941 RNU6-748P-201ENST00000384648 107 ntBASIC3.57□□□□□ -1.84
LTBRP36941 Y_RNA.581-201ENST00000391017 97 ntBASIC3.57□□□□□ -1.84
LTBRP36941 EI24P2-201ENST00000397776 1076 ntBASIC3.57□□□□□ -1.84
LTBRP36941 AC012306.1-201ENST00000423267 114 ntBASIC3.57□□□□□ -1.84
LTBRP36941 AL358075.3-201ENST00000426289 226 ntBASIC3.57□□□□□ -1.84
LTBRP36941 AP000705.1-201ENST00000454567 350 ntBASIC3.57□□□□□ -1.84
LTBRP36941 CEACAMP4-201ENST00000457676 421 ntBASIC3.57□□□□□ -1.84
LTBRP36941 SNRPGP3-201ENST00000469405 227 ntBASIC3.57□□□□□ -1.84
LTBRP36941 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.57□□□□□ -1.84
LTBRP36941 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.57□□□□□ -1.84
LTBRP36941 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.57□□□□□ -1.84
LTBRP36941 SNORA31.6-201ENST00000516241 130 ntBASIC3.57□□□□□ -1.84
LTBRP36941 RNU6-111P-201ENST00000517179 105 ntBASIC3.57□□□□□ -1.84
LTBRP36941 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
LTBRP36941 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.57□□□□□ -1.84
LTBRP36941 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.57□□□□□ -1.84
LTBRP36941 BRDTP1-201ENST00000605735 677 ntBASIC3.57□□□□□ -1.84
LTBRP36941 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.57□□□□□ -1.84
LTBRP36941 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.57□□□□□ -1.84
LTBRP36941 AC006111.3-201ENST00000622137 383 ntBASIC3.57□□□□□ -1.84
LTBRP36941 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LTBRP36941 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LTBRP36941 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
LTBRP36941 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LTBRP36941 MIR449A-201ENST00000362113 91 ntBASIC3.56□□□□□ -1.84
LTBRP36941 Y_RNA.16-201ENST00000362421 102 ntBASIC3.56□□□□□ -1.84
LTBRP36941 SNORD115-8-201ENST00000363856 82 ntBASIC3.56□□□□□ -1.84
LTBRP36941 SNORD115-38-201ENST00000365037 82 ntBASIC3.56□□□□□ -1.84
LTBRP36941 Y_RNA.541-201ENST00000384640 113 ntBASIC3.56□□□□□ -1.84
LTBRP36941 RNA5SP252-201ENST00000391131 119 ntBASIC3.56□□□□□ -1.84
LTBRP36941 RNU6-1001P-201ENST00000411265 100 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AC004383.1-201ENST00000438135 289 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AC090525.1-201ENST00000479116 478 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.56□□□□□ -1.84
LTBRP36941 RNU6-1338P-201ENST00000516328 91 ntBASIC3.56□□□□□ -1.84
LTBRP36941 RNU5B-3P-201ENST00000516601 115 ntBASIC3.56□□□□□ -1.84
LTBRP36941 RN7SKP49-201ENST00000516675 260 ntBASIC3.56□□□□□ -1.84
LTBRP36941 SNORA31.16-201ENST00000516773 139 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AC115990.1-201ENST00000526957 301 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AC022080.3-201ENST00000544433 482 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AC105137.2-201ENST00000569073 466 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AL078605.1-201ENST00000603529 500 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AC010900.2-201ENST00000604508 210 ntBASIC3.56□□□□□ -1.84
LTBRP36941 AC093732.2-201ENST00000607950 274 ntBASIC3.56□□□□□ -1.84
LTBRP36941 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.56□□□□□ -1.84
LTBRP36941 AL137790.1-201ENST00000634283 177 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms